Job Description P21189 Confidence 100.00% Date Thu Jan 5 11:38:01 GMT 2012 Rank 15 Aligned Residues 289 % Identity 23% Template d1s5ja2 SCOP info DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Resolution 2.40

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		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	F	G	H	L	Y	F	P	R	M	H	R	A	G	Y	V	A	P	N	L	G	E	V	P	P	H	A	S	P	G	G	Y	V	M	D	S	R	P	G	L	Y	D	S	V	L	V	L	D	Y	K	S	L	Y	P	S	I	I	R	T	F	L	I	D	P	V	G	L	V	E	G	M	A	Q	P	D	P	E	H
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		S	T	W	V	K	N	L	Y	Y	W	E	H	R	K	R	N	W	L	I	P	L	K	E	.	E	I	L	A	K	S	S	N	A	V	V	I	D	P	P	A	G	I	F	F	N	I	T	V	L	D	F	A	S	L	Y	P	S	I	I	R	T	W	N	L	S	Y	E	T	V	D	I	Q	Q	C	K	K	P	Y	E	V
Template Known Secondary structure																	T								.					T	T										S												T	T									T	T			T	T	T	B	S		S			S	S
Template Predicted Secondary structure																									.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		450			.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.														.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure			.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	.	.	T	E	G	F	L	D	A	W	F	S	R	E	K	H	C	L	P	E	I	V	T	N	I	W	H	G	R	D	E	A	K	R	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	P	L	S	Q	A	L	K	I	I	M	N	A	F	Y	G	V	L	G	T	T	A	C	R	F	F	D	P	R
Query Conservation			.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	E	T	G	E	V	L	H	I	V	C	M	D	R	P	G	I	T	A	V	I	T	G	L	L	R	D	F	R	V	K	I	Y	K	K	K	A	K	N	P	N	N	S	E	E	Q	K	L	L	Y	D	V	V	Q	R	A	M	K	V	F	I	N	A	T	Y	G	V	F	G	A	E	T	F	P	L	Y	A	P	R
Template Known Secondary structure				S	S	S						B			S	S																		T						T		T	T	S																												S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	S	I	T	M	R	G	H	Q	I	M	R	Q	T	K	A	L	I	E	A	Q	G	Y	D	V	I	Y	G	D	T	D	S	T	F	V	W	L	K	G	A	H	S	E	E	E	A	A	K	I	G	R	A	L	V	Q	H	V	N	A	W	W	A	E	T	L	Q	K	Q	R	L	T	S	A	L	E	L	E	Y
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	E	S	V	T	A	L	G	R	Y	V	I	T	S	T	V	K	K	A	R	E	E	G	L	T	V	L	Y	G	D	T	D	S	L	F	L	L	N	P	P	.	.	.	.	.	.	.	K	N	S	L	E	N	I	I	K	W	V	K	T	T	F	.	.	.	.	.	.	.	.	.	.	.	N	L	D	L	E	V
Template Known Secondary structure																							T	T	T								T	T						S			.	.	.	.	.	.	.															S	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.								.	.	.	.	670	.	.	.	.	.	.	.	.	.	680												.	.	.	.	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	H	F	C	R	F	L	M	P	T	I	R	G	A	D	T	G	S	K	K	R	Y	A	G	L	I	Q	E	G	D	K	Q	R	M	V	F	K	G	L	E	T	V	R	T	D	W	T	P	L	A	Q	Q	F	Q	Q	E	L	Y	L	R	I	F	R	N	E	P	Y	Q	E	Y	V	R	E	T	I	D	K	L	M
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.												.	.	.																									.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.												.	.	.																									.	.	.	.	.	.
Template Sequence		D	K	T	Y	K	F	V	A	.	.	.	.	.	.	.	.	.	.	.	F	S	N	Y	F	G	V	Y	Q	D	G	.	.	.	K	V	D	I	K	G	M	L	V	V	K	K	V	F	N	E	V	K	E	L	M	I	S	I	.	.	.	.	.	.	N	S	P	N	D	V	K	E	I	K	R	K	I	V	D	V	V
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.									S	S	S	.	.	.						S						S											T	T	.	.	.	.	.	.			S			T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.												.	.	.																									.	.	.	.	.	.
Template SS confidence
		687	.	.	690	.	.	.	.												.	.	.	.	.	700	.	.	.	.	.				.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.							730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
		675	.	.	.	.		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	G	E	L	D	.	A	R	L	V	Y	R	K	R	L	R	R	P	L	S	E	Y	Q	R
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		K	G	S	Y	E	K	L	K	I	D	A	E	K	Y	L	E	A	L	R	S	T	F	E	Q
Template Known Secondary structure							T	T				S	S	T	T						T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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