Job Description P21189 Confidence 100.00% Date Thu Jan 5 11:38:01 GMT 2012 Rank 22 Aligned Residues 326 % Identity 16% Template d1noya_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.20

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	D	T	P	Q	G	T	E	V	S	F	W	L	A	T	D	N	G	P	L	Q	V	T	L	A	P	Q	E	S	V	A	F	I	P	A	D	Q	V	P	R	A	Q	H	I	L	Q	G	E	Q	G	F	R	L	T	P	L	A	L	K	D	F	H	R	Q	P	V	Y	G	L	Y	C	R	A	H	R	Q	L	M	N
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	I	E	T	V	G	N	N	I	V	E	R	Y	I	D	E	N	G	K	E	R	T	R	E	V	E	Y	L	P	T	M	F	R	H	C	K	E	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	K	D	I	Y	G	K	N	C	A	P	Q	K	F	P	S	M	K	D	A	R	D
Template Known Secondary structure								T	T									T	T	S												S				G	G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T	T	T									S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	K	R	L	R	E	G	G	V	T	V	Y	E	A	D	V	R	P	P	E	R	Y	L	M	E	R	F	I	T	S	P	V	W	V	E	G	D	M	H	N	G	T	I	V	N	A	R	L	K	P	H	P	D	Y	R	P	P	L	K	W	V	S	I	D	I	E	T	T	R	H	G	E	L	Y	C	I	G	L	E
Query Conservation
Alig confidence									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		W	M	K	R	M	E	D	.	.	.	.	.	I	G	L	E	A	L	G	M	N	D	F	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	S	D	T	Y	G	S	E	I	V	Y	D	R	K	F	V	R	V	A	N	C	D	I	E	V	T	G	D	.	.	.	.	K	F	P	D	P
Template Known Secondary structure									.	.	.	.	.			T	T		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		S						G	G	G													S	.	.	.	.	S				T
Template Predicted Secondary structure									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.																	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	D	F	E	L	E	Y	V	A	S	R	P	Q	L	L	E	K	L	N	A	W	F	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	A	E	Y	E	I	D	A	I	T	H	Y	D	S	I	D	D	R	F	Y	V	F	D	L	L	N	S	M	Y	G	S	V	S	K	W	D	A	K	L	A	A	K	L	D	C	E	G	G	D	E	V	P	Q	E	I	L	D	R	V	I	Y	M	P	F	D	N	E	R	D	M	L	M	E	Y	I	N	L	W	E
Template Known Secondary structure		T	T			S										T	T	T	T											S	S													S		G	G	G	T										T	T							S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																.	.	.																																											.
Query SS confidence																																.	.	.																																											.
Query Sequence		N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R	M	L	Q	K	H	A	E	R	Y	R	L	P	.	.	.	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	.	W	N	F	S
Query Conservation																																.	.	.																																											.
Alig confidence																																.	.	.																																											.
Template Conservation
Template Sequence		Q	K	R	P	A	I	F	T	G	W	N	I	E	G	F	D	V	P	Y	I	M	N	R	V	K	M	I	L	G	E	R	S	M	K	R	F	S	P	I	G	R	V	K	S	K	L	L	Q	N	M	Y	G	S	K	E	I	Y	S	I	D	G	V	S	I	L	D	Y	L	D	L	Y	K	K	F	A	F	T	N	L	P
Template Known Secondary structure			S			S					S	S	T	T	T	T																			G	G	G	S	T	T	S									G	G	G		S							T	T	S													T					S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	L	E	T	V	A	Q	E	L	L	G	E	G	K	S	I	D	N	P	W	D	R	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T	E	I	M	P	F	L	L	E	R	A	T	V	N	G	L	P	V	D	R	H	G	G	S
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		S	F	S	L	E	S	V	A	Q	H	E	T	K	K	G	K	L	P	Y	D	.	.	.	.	.	G	P	I	N	K	L	R	E	T	N	H	Q	R	Y	I	S	Y	N	I	I	D	V	E	S	V	Q	A	I	D	K	I	R	G	F	I	D	L	V	L	S	M	S	Y	Y	A	K	M	P	F	S	G	V	M	S	P
Template Known Secondary structure				S										S							S	.	.	.	.	.	S		G	G	G																																									T			G	G	G	G	G
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	F	G	H	L	Y	F	P	R	M	H	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	T	W	D	A	I	I	F	N	S	L	K	G	E
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions