Job Description P21189 Confidence 69.87% Date Thu Jan 5 11:38:01 GMT 2012 Rank 56 Aligned Residues 145 % Identity 15% Template c3cymA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis Resolution 2.10 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	S	I	D	I	E	T	T	R	H	G	E	L	Y	C	I	G	L	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	L	E	Y	V	A	S	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Sequence		S	L	A	A	D	A	E	R	A	S	G	F	.	.	.	.	.	.	.	R	Y	G	H	E	D	W	L	V	Q	F	K	R	D	G	A	G	I	G	L	L	D	P	.	.	.	.	.	.	Q	A	L	A	A	A	G	A	D	W	N	D	F	N	R	A	V	G	D	A	V	W	I	L	H	D	S	L	Q	D	L	P
Template Known Secondary structure											T	T	T	.	.	.	.	.	.	.	S	S	S												T	T								.	.	.	.	.	.						T	T											T	T						S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	G	E	G	K	S	I	D	N	P	W
Query Conservation
Alig confidence						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		G	F	D	E	.	.	.	.	L	G	M	E	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	F	D	T	E	I	A	A	R	L	.	.	L	G	L	K	R	F	G	L	A	A	V	T	E	H	F	L	G	L	T	L	A	K	E	H	S	A
Template Known Secondary structure						.	.	.	.		T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	T	T		S	S		S																		T	T
Template Predicted Secondary structure						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		105	.	.	.					.	110	.	.	.	.																												.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T	E
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		A	D	W	.	.	.	.	.	S	Y	R	P	L	P	R	D	W	R	N	Y	A	A	L	D	V	E	L	L	I	E	L	E	T	K	M	R
Template Known Secondary structure				T	.	.	.	.	.	T		S	S															T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		152	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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