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Job DescriptionP21189
Confidence95.79%DateThu Jan 5 11:38:01 GMT 2012
Rank38Aligned Residues135
% Identity27%Templatec2p1jB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190........ .200.....
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Query Sequence  KWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYV. . . . . . . . . . . . . . . . . . . . . . . . . ASRPQLL
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Template Sequence  TFVVLDFETTGLD. . . . . . . . . PQVDEIIEIGAVKIQGGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVL
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   357..360......... 370.........380.........390.........400.........410.........420.......
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  EKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAF
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Template Sequence  PEFLGF. . . LEDSIIVAHNA. NFDYRFLRLWIKKVMGL. . . . . . . . . . . . . . . . . . . . . . . . . DWERPYIDTLALAKSL.
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   428.430... ......440.... .....450.........460. ........470.......
 
   286...290.........300.........310.........320.........330.........340......
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Query Sequence  WNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKT
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Template Sequence  LKLRSYSLDSVVEKLGLGPFRHHRA. . . . . . . . . . . . . . . . . . . . . . LDDARVTAQVFLRF
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   478.480.........490.........500.. .......510......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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