Job Description P21189 Confidence 90.76% Date Thu Jan 5 11:38:01 GMT 2012 Rank 52 Aligned Residues 144 % Identity 21% Template c2hbkA_ PDB info PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p,2 reveals an interplay between the active site and the hrdc3 domain; protein in complex with mn Resolution 2.25 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	V	S	I	D	I	E	T	T	R	H	G	E	L	Y	C	I	G	L	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	L	E	Y	V	A	S	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.																		.	.	.	.	.	.																				.	.
Template Conservation															.	.	.	.	.	.	.																		.	.	.	.	.	.																				.	.
Template Sequence		K	E	I	A	V	D	L	E	H	H	D	Y	R	.	.	.	.	.	.	.	S	Y	Y	G	I	V	C	L	M	Q	I	S	T	R	E	R	D	.	.	.	.	.	.	Y	L	V	D	T	L	K	L	R	E	N	L	H	I	L	N	E	V	F	.	.	T	N	P	S	I	V	K	V	F	H	G	A	F	M	D	I
Template Known Secondary structure		S											S	S	.	.	.	.	.	.	.	S	S	S											S	S			.	.	.	.	.	.					T	T	T	T	T	T	T	G	G	G	G					.	.	T		T	T	S					S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.																		.	.	.	.	.	.																				.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	G	E	G	K	S	I	D	N	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		I	W	L	Q	R	D	L	G	L	Y	V	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	D	T	Y	H	A	S	K	A	.	.	I	G	L	P	R	H	S	L	A	Y	L	L	E	N	F	A	N	F	K	T	S	K	K	Y	Q
Template Known Secondary structure													S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.		T		S			S																T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310																															.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	R	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		L	A	D	W	.	.	.	.	.	R	I	R	P	L	S	K	P	M	T	A	A	A	R	A	D	T	H	F	L	L	N	I	Y	D	Q	L
Template Known Secondary structure		T	S		T	.	.	.	.	.	T		S	S															T
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		346	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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