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Job DescriptionP21189
Confidence98.17%DateThu Jan 5 11:38:01 GMT 2012
Rank27Aligned Residues160
% Identity18%Templatec1tk0A_
PDB info PDB header:transferase/electron transport/dnaChain: A: PDB Molecule:dna polymerase; PDBTitle: t7 dna polymerase ternary complex with 8 oxo guanosine and2 ddctp at the insertion site
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  WVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLR
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Template Sequence  MIVSDIEANALL. . . . . . . ESVTKFHCGVIYDYSTA. . . . EYVSYRPSDFGAYLDALEAEVAR. . GGLIVFHNGHKYDVP
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SS
G.......GG


TTTT....
GGGT..T

SSTTTT
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   1........10.. .......20......... 30.........40.........50.. .......60.......
 
   232.......240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  MLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPW
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Template Sequence  ALTKLAKLQLNREFHLPREN. . . . . . . . . . . . . . . . . . . . . . CIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYR
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GGG......................TTTS


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   68.70.........80....... ..90.........100.........110.........120.....
 
   312...... .320.........330.........340......
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Query Sequence  DRMDEID. . . . . . . . . . . . . . . . . . . RRFAEDKPALATYNLKDCELVTQIFHKT
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Template Sequence  LGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKL
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TTGGGTS

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   132.......140.........150.........160.........170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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