Job Description P37327 Confidence 100.00% Date Thu Jan 5 11:55:13 GMT 2012 Rank 2 Aligned Residues 226 % Identity 18% Template c3kcvG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:probable formate transporter 1; PDBTitle: structure of formate channel Resolution 3.20 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	D	A	M	A	L	L	W	S	A	I	A	A	G	L	S	M	G	A	S	L	L	A	K	G	I	F	Q	V	E	L	E	G	V	P	.	.	G	S	F	L	L	E	N	L	G	Y	T	F	G	F	I	I	V	I	M	A	R	Q	Q	L	F	T	E	N	T	V	T	A	V	L	P	V	M	Q	K	P	T	M	S
Query Conservation																																					.	.
Alig confidence																																					.	.																															.											.	.
Template Conservation																																																																					.											.	.
Template Sequence		K	H	P	L	K	T	F	Y	L	A	I	T	A	G	V	F	I	S	I	A	F	V	F	Y	I	T	A	T	T	G	T	G	T	M	P	F	G	M	A	K	L	V	G	G	I	C	F	S	L	G	L	I	L	C	V	V	C	G	A	D	L	F	T	S	T	V	L	.	I	V	V	A	K	A	S	G	R	I	.	.
Template Known Secondary structure																														T	T		S	S	S																							T	T				T	T	T	T			.						S	T	T		S	.	.
Template Predicted Secondary structure																																																																					.											.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		N	V	G	L	L	I	R	L	W	G	V	V	L	L	G	N	I	L	G	T	G	I	A	A	W	A	F	E	Y	M	P	I	F	N	.	.	.	E	E	T	R	D	A	F	V	K	I	G	M	D	V	M	K	N	T	P	S	E	M	F	A	N	A	I	I	S	G	W	L	I	A	T	M	V	W	M	F	P	A	A
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		T	W	G	Q	L	A	K	N	W	L	N	V	Y	F	G	N	L	V	G	A	L	L	F	V	L	L	M	W	L	S	G	E	Y	M	T	A	N	G	Q	W	G	L	N	V	L	Q	T	A	D	H	K	V	H	H	T	F	I	E	A	V	C	L	G	I	L	A	N	L	M	V	C	L	A	V	W	M	S	Y	S	G
Template Known Secondary structure								T	T																							T	G	G	G	T	T	T	T													T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		209	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	.	.	A	K	I	V	V	I	I	L	M	T	W	L	I	A	L	G	D	T	T	H	I	V	V	G	S	V	E	I	L	Y	L	V	F	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	H	W	S	D	F	I	W	P	F	A	L	P	T	L	A	G	N	I	C	G
Query Conservation				.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	L	M	D	K	A	F	I	M	V	L	P	V	A	M	F	V	A	S	G	F	E	H	S	I	A	N	M	F	M	I	P	M	G	I	V	I	R	D	F	A	S	P	E	F	W	T	A	V	G	S	A	P	E	N	F	S	H	L	T	V	M	N	F	I	T	D	N	L	I	P	V	T	I	G	N	I	I	G
Template Known Secondary structure		S	S							T	T										T	T																														T			G	G	G	G	T	T										T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	F	I	F	A	L	M	S	H	A	Q	I	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	L	L	V	G	L	T	Y	W	V	I	Y	L	R
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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