Job Description P37327 Confidence 12.08% Date Thu Jan 5 11:55:13 GMT 2012 Rank 17 Aligned Residues 226 % Identity 11% Template c3d9sB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin-5; PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure Resolution 2.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																									.																										.	.
Query SS confidence																																									.																										.	.
Query Sequence		K	E	L	E	R	D	A	M	A	L	L	W	S	A	I	A	A	G	L	S	M	G	A	S	L	L	A	K	G	I	F	Q	V	E	L	E	G	V	P	.	G	S	F	L	L	E	N	L	G	Y	T	F	G	F	I	I	V	I	M	A	R	Q	Q	L	F	.	.	T	E	N	T	V	T	A	V	L	P	V	M	Q
Query Conservation																																									.																										.	.
Alig confidence										.	.																														.																										.	.
Template Conservation										.	.
Template Sequence		K	K	E	V	C	S	V	A	.	.	F	L	K	A	V	F	A	E	F	L	A	T	L	I	F	V	F	F	G	L	G	S	A	L	K	W	P	S	A	L	P	T	I	L	Q	I	A	L	A	F	G	L	A	I	G	T	L	A	Q	A	L	G	P	V	S	G	G	H	I	N	P	A	I	T	L	A	L	L	V	G
Template Known Secondary structure						S	S			.	.																						T	T	S			T	T	S																																									T
Template Predicted Secondary structure										.	.
Template SS confidence
		2	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	T	M	S	N	V	G	L	L	I	R	L	W	G	V	V	L	L	G	N	I	L	G	T	G	I	A	A	W	A	F	E	Y	M	P	I	F	N	E	E	T	R	D	A	F	V	K	I	G	M	D	V	M	K	N	T	P	S	E	M	F	A	N	A	I	I	S	G	W	L	I	A	T	M	V	W	M	F	P
Query Conservation
Alig confidence					.	.																												.	.	.	.	.	.	.
Template Conservation					.	.																												.	.	.	.	.	.	.
Template Sequence		N	Q	I	.	.	S	L	L	R	A	F	F	Y	V	A	A	Q	L	V	G	A	I	A	G	A	G	I	L	Y	G	V	A	.	.	.	.	.	.	.	P	L	N	A	R	G	N	L	A	V	N	A	L	N	N	N	T	T	Q	G	Q	A	M	V	V	E	L	I	L	T	F	Q	L	A	L	C	I	F	A	S	T
Template Known Secondary structure		T		S	.	.																											S	.	.	.	.	.	.	.						T	T	T	T						T	T	S																								T
Template Predicted Secondary structure					.	.																												.	.	.	.	.	.	.
Template SS confidence
		80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		207	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		A	A	G	A	.	.	.	.	.	.	.	A	K	I	V	V	I	I	L	M	T	W	L	I	A	L	G	D	T	T	H	I	V	V	G	S	V	E	I	L	Y	L	V	F	N	G	T	L	H	W	S	D	F	I	W	P	F	A	L	P	T	L	A	G	N	I	C	G	G	T	F	I	F	A	L	M	S	H	A	Q
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		D	S	R	R	T	S	P	V	G	S	P	A	L	S	I	G	L	S	V	T	L	G	H	L	V	G	I	Y	F	T	G	C	S	M	N	P	A	R	S	F	G	P	A	V	V	M	N	R	F	S	P	A	H	W	V	F	W	V	G	P	I	V	.	.	.	.	.	.	G	A	V	L	A	A	I	L	Y	F	Y	L
Template Known Secondary structure			S	S			S																									S			S	S											T	T				T	T	T	T									.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	N	D	M	S	N	K	R	K	A	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	P	N	S	L	S	L	S	E	R	V	A
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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