Job Description P37327 Confidence 58.78% Date Thu Jan 5 11:55:13 GMT 2012 Rank 10 Aligned Residues 213 % Identity 13% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		E	R	D	A	M	A	L	L	W	S	A	I	A	A	G	L	S	M	G	A	S	L	L	A	K	G	I	F	Q	V	.	.	.	.	.	.	.	.	.	.	E	L	E	G	V	P	G	S	F	L	L	E	N	L	G	Y	T	F	G	F	I	I	V	I	M	A	R	Q	Q	L	F	T	E	.	.	.	N	T	V	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.																															.			.	.	.
Template Conservation																																																																								.
Template Sequence		G	S	D	S	V	R	N	H	F	I	A	M	S	G	E	F	V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G	F	G	F	G	V	M	V	G	V	F	I	T	Y	R	V	.	S	G	G	N	L	N	P	A	V
Template Known Secondary structure		T	T	T	S																														T	T	S				G	G	G																										T	T	T	.	T					S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	P	V	M	Q	K	P	T	M	S	N	V	G	L	L	I	R	L	W	G	V	V	L	L	G	N	I	L	G	T	G	I	A	A	W	A	F	E	Y	M	P	I	F	N	E	E	T	R	D	A	F	V	K	I	G	M	D	V	M	K	N	T	P	S	E	M	F	A	N	A	I	I	S	G	W	L	I	A
Query Conservation
Alig confidence												.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	A	L	V	L	A	R	A	I	.	.	P	P	F	R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A	M	T	P	G	E	I	A	F	A	N	A	L	G	G	.	.	.	.	.	.	.	.	.	.	G	A	S	R	T	R	G	L	F	L	E	A	F	G	T	A	I	L	C
Template Known Secondary structure								T	T	S	S	.	.																											S		S	S				S					T	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure												.	.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		T	M	V	W	M	F	P	A	A	G	A	.	.	.	.	.	.	A	K	I	V	V	I	I	L	M	T	W	L	I	A	L	G	D	T	T	H	I	V	V	G	S	V	E	I	L	Y	L	V	F	N	G	T	L	H	W	S	D	F	I	W	P	F	A	L	P	T	L	A	G	N	I	C	G	G	T	F	I	F	A
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																									.	.	.	.																								.
Template Conservation																																											.	.	.	.																								.
Template Sequence		L	T	V	L	M	L	A	V	E	K	H	R	A	T	W	F	A	P	F	V	I	G	I	A	L	L	I	A	H	L	I	C	I	Y	Y	T	G	A	G	L	N	.	.	.	.	P	A	R	S	F	G	P	A	V	A	A	R	S	F	P	N	Y	H	W	I	Y	W	L	.	G	P	I	L	G	A	F	L	A	Y	S
Template Known Secondary structure								T	T	S		S	T	T	G	G	G																									S	.	.	.	.												T				T	T	T	T					.
Template Predicted Secondary structure																																											.	.	.	.																								.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	S	H	A	Q	I	R	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	W	Q	M	W	K	W	L	N	Y
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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