Job Description P37327 Confidence 74.09% Date Thu Jan 5 11:55:13 GMT 2012 Rank 5 Aligned Residues 220 % Identity 10% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		R	D	A	M	A	L	L	W	S	A	I	A	A	G	L	S	M	G	A	S	L	L	A	K	G	I	F	Q	V	E	L	E	G	V	P	G	S	F	L	L	E	N	L	G	Y	T	F	G	F	I	I	V	I	M	A	R	Q	Q	L	F	T	E	.	.	.	.	N	T	V	T	A	V	L	P	V	M	Q	K	P	T
Query Conservation																																																																.	.	.	.
Alig confidence															.	.	.	.																																											.	.		.	.	.	.
Template Conservation															.	.	.	.																																											.	.
Template Sequence		A	S	F	W	R	A	I	C	A	E	F	F	A	.	.	.	.	S	L	F	Y	V	F	F	G	L	G	A	S	L	R	W	A	G	P	L	H	V	L	Q	V	A	L	A	F	G	L	A	L	A	T	L	V	Q	A	V	G	H	I	.	.	S	G	A	H	V	N	P	A	V	T	F	A	F	L	V	G	S	Q	M
Template Known Secondary structure			T	T											.	.	.	.														S																										T	T	T	.	.	T					S										T	T	S	S
Template Predicted Secondary structure															.	.	.	.																																											.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	N	V	G	L	L	I	R	L	W	G	V	V	L	L	G	N	I	L	G	T	G	I	A	A	W	A	F	E	Y	M	P	I	F	N	E	E	T	R	D	A	F	V	K	I	G	M	D	V	M	K	N	T	P	S	E	M	F	A	N	A	I	I	S	G	W	L	I	A	T	M	V	W	M	F	P	A	A	G
Query Conservation
Alig confidence		.	.						.	.	.	.																						.	.	.
Template Conservation		.	.						.	.	.	.																						.	.	.
Template Sequence		.	.	S	L	L	R	A	.	.	.	.	I	C	Y	M	V	A	Q	L	L	G	A	V	A	G	A	A	V	L	Y	S	V	.	.	.	T	P	P	A	V	R	G	N	L	A	L	N	T	L	H	P	G	V	S	V	G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	E	R
Template Known Secondary structure		.	.						.	.	.	.																						.	.	.	S		T	T	T		T	T	T	T						T	T	S																										T	T
Template Predicted Secondary structure		.	.						.	.	.	.																						.	.	.
Template SS confidence
				82	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	A	K	I	V	V	I	I	L	M	T	W	L	I	A	L	G	D	T	T	H	I	V	V	G	S	V	E	I	L	Y	L	V	F	N	G	T	L	H	W	S	D	F	I	W	P	F	A	L	P	T	L	A	G	N	I	C	G	G	T	F	I	F	A	L	M	S	H	A	Q	I	R	N
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																																														.						.	.	.	.	.	.
Template Conservation																																																							.						.	.	.	.	.	.
Template Sequence		R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	N	F	T	N	H	W	V	Y	W	.	V	G	P	V	I	.	.	.	.	.	.	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P
Template Known Secondary structure		S		S																																									T			T	T	T	T				.						.	.	.	.	.	.											T	T	T	S
Template Predicted Secondary structure																																																							.						.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	S	N	K	R	K	A	E	A	R	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	S	V	S	E	R	L	S	I	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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