Job Description P0A855 Confidence 99.75% Date Thu Jan 5 11:06:56 GMT 2012 Rank 50 Aligned Residues 255 % Identity 14% Template d2madh_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution UNK

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	.	.	.	.	.	.	.	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																																									.																		.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		D	G	R	R	S	Y	I	N	L	P	A	H	H	S	A	I	I	Q	Q	W	V	L	D	A	G	S	G	S	I	L	G	H	V	N	G	G	F	L	P	.	N	P	V	A	A	H	S	G	S	E	F	A	L	A	S	T	S	F	S	R	I	A	K	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F	L	P
Template Known Secondary structure			T	T								G	G	G		S									T	T	T	T										S	S		.						T	T	S	S										T	T	S	S	S	S											T	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		237	.									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																																							.	.	.	.	.	270
Predicted Secondary structure				.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	.	.	.	.	.	.	.	.	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	S	L	N	L
Query Conservation				.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	D	I	E	L	P	D	A	P	R	F	D	V	G	P	Y	S	W	M	N	A	N	T	P	N	N	A	D	L	L	F	F	Q	F	A	A	G	P	A	V	G	L	V	V	Q	G	G	S	S	D	D	Q	L	L	S	S	P	T	C	Y	H	I	H	P	G	A	P	S	T	F	Y	L	L	C	A	Q	G	G	L
Template Known Secondary structure		S						T	T						S				T	T	S	S				T	T	S	S	B							S	S	S							B	T	T	T	T	B									S			S					B	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	T	D	H	A	G	G	A	A	G	A	G	L	V	G	A	M	L	T	A	A	Q	N	L	L	T	Q	P	A	Q	A	N	K	S	G	R	I	V	W	P	V	Y	S	G	K	I	L	Q	A	D	I	S	A	A	G	A	T	N	K	A	P	I	D	A	L	S	G	G	R	K	A	D	T	W	R	P	G	G	W
Template Known Secondary structure								T	T											S		T	T	S				S						T	T	T	T							S	S	S									T	T										S	S							T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.								.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.														.
Query SS confidence																						.	.	.	.	.	.	.														.
Query Sequence		Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	.	.	.	.	.	.	.	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T
Query Conservation																						.	.	.	.	.	.	.														.
Alig confidence																						.	.	.	.	.	.	.														.																																.
Template Conservation																																																																										.
Template Sequence		Q	Q	V	A	Y	L	K	S	S	D	G	I	Y	L	L	T	S	E	Q	S	A	W	K	L	H	A	A	A	K	E	V	T	S	V	T	G	L	V	G	Q	T	S	S	Q	I	S	L	G	H	D	V	D	A	I	S	V	A	Q	D	G	G	P	D	L	Y	A	L	S	A	G	T	E	.	V	L	H	I	Y	D	A
Template Known Secondary structure		S						T	T	T	T											T	T		T	T	S										T	T	T																				S	S	S	S								T	T	T	T	.							T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	F	K	A	R	L	P	A	T	D	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	G	D	Q	D	Q	S	T	V	E	L	G	S
Template Known Secondary structure		T	T												S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions