Job Description P0A855 Confidence 78.26% Date Thu Jan 5 11:06:56 GMT 2012 Rank 174 Aligned Residues 182 % Identity 10% Template d1xipa_ SCOP info 7-bladed beta-propeller Nucleoporin domain Nucleoporin domain Resolution 2.50

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.																																																					.	.
Query SS confidence																											.																																																					.	.
Query Sequence		T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	.	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	.	.
Query Conservation																											.																																																					.	.
Alig confidence																											.																						.	.										.	.	.																		.	.
Template Conservation																																																	.	.										.	.	.
Template Sequence		I	F	V	C	F	H	G	D	Q	V	L	V	S	T	R	N	A	L	Y	S	L	D	L	E	E	L	S	E	F	R	T	V	T	S	F	E	K	P	V	F	Q	L	K	N	V	N	N	.	.	T	L	V	I	L	N	S	V	N	.	.	.	D	L	S	A	L	D	L	R	T	K	S	T	K	Q	L	A	Q	N	V
Template Known Secondary structure								T	T							S	S							S	S	S	T	T									S	S									S	S	.	.							T	T	S	.	.	.							T	T	T									S
Template Predicted Secondary structure																																																	.	.										.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
						242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D
Query Conservation		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	F	D	V	T	N	S	Q	L	A	V	L	L	K	D	R	S	F	Q	S	F	A	W	R	N	G	E	X	E	K	Q	F	E	F	S	L	P	S	E	L	E	E	L	P	V	E	E	Y	S	P	L	S	V	T	I	L	S	P	Q	D	F	L	A	V	F	G	N	V	I	S	E	T	D	D	E	V	S	Y	D
Template Known Secondary structure								S	S							T	T	S									T	T																T	S		T	T	T	S								S	S	S	S												S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	.	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		Q	K	X	Y	I	I	K	H	I	D	G	S	A	S	F	Q	E	T	F	D	I	T	P	P	F	G	Q	I	V	R	F	P	Y	X	Y	K	V	T	L	S	G	L	I	E	P	D	A	N	V	N	V	L	A	S
Template Known Secondary structure											T	T								S	S	S							S																	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions