Job Description P0A855 Confidence 99.76% Date Thu Jan 5 11:06:56 GMT 2012 Rank 49 Aligned Residues 222 % Identity 14% Template d1ospo_ SCOP info open-sided beta-meander Outer surface protein Outer surface protein Resolution 1.95

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		187	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220												.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure												.	.																									.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence												.	.																									.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		Y	D	G	Y	N	Q	F	V	V	H	.	.	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	.	.	.	.	.	.	.	.	.	.	.	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	.	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S
Query Conservation												.	.																									.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence												.	.																									.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		L	D	E	K	N	S	V	S	V	D	L	P	G	E	M	K	V	L	V	S	K	E	K	N	K	D	G	K	Y	D	L	I	A	T	V	D	K	L	E	L	K	G	T	S	D	K	N	N	G	S	G	V	L	E	G	V	K	A	D	K	C	K	V	K	L	T	I	S	D	D	L	G	Q	T	T	L	E	V	F	K
Template Known Secondary structure				G	G	G							G	G	G							S	S			T	T	S									T	T								S	S	S	S	S									T	T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																							.																																.
Query SS confidence																																							.																																.
Query Sequence		P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	.	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	.	G	G	A	P	Q	R	I	T	W	E
Query Conservation																																							.																																.
Alig confidence											.	.	.	.	.	.	.	.	.																				.																																.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		E	D	G	K	T	L	V	S	K	.	.	.	.	.	.	.	.	.	K	V	T	S	K	D	K	S	S	T	E	E	K	F	N	E	K	G	E	V	S	E	K	I	I	T	R	A	D	G	T	R	L	E	Y	T	G	I	K	S	D	G	S	G	K	A	K	E	V	L	K	G	Y	V	L	E	G	T	L	T	A	E
Template Known Secondary structure		T	T	S	S	S					.	.	.	.	.	.	.	.	.					T	T	S									T	T	S										T	T	S							S			T	T	S									S	S									S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	.	.	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G
Query Conservation																																																																.	.
Alig confidence																			.																																													.	.					.	.	.
Template Conservation																			.																																																			.	.	.
Template Sequence		K	T	T	L	V	V	K	E	G	T	V	T	L	S	K	N	I	.	S	K	S	G	E	V	S	V	E	L	N	D	T	D	S	S	A	A	T	K	K	T	A	A	W	N	S	G	T	S	T	L	T	I	T	V	N	S	K	K	T	K	D	L	V	F	T	K	E	N	.	.	.	T	I	T	V	Q	Q	Y	D	S
Template Known Secondary structure										T	T								.		T	T														T	T	T								G	G	G	T							T	T										T	T	S	.	.	.							B		T
Template Predicted Secondary structure																			.																																																			.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250
		409	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	A	R	L	P	A	T	D	G	Q	V	K
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		N	G	.	T	K	L	E	G	S	A	V	E	I	T
Template Known Secondary structure		T	S	.	S	S	B		S
Template Predicted Secondary structure				.
Template SS confidence
		251	.		.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions