Job Description P0A855 Confidence 99.94% Date Thu Jan 5 11:06:56 GMT 2012 Rank 12 Aligned Residues 264 % Identity 19% Template d1orva1 SCOP info 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Resolution 1.80

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	.	.	.	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																													.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		S	P	D	R	Q	F	I	L	F	E	Y	N	Y	V	K	Q	W	R	H	S	Y	T	A	S	Y	D	I	Y	D	L	N	K	R	Q	L	I	T	E	E	R	I	P	N	N	T	Q	W	I	T	W	S	P	V	G	H	K	L	A	Y	V	W	N	N	.	.	.	.	D	I	Y	V	K	N	E	P	N	L	S	S	Q
Template Known Secondary structure			T	T	S	S												S	S	S											T	T	T	T					S	S				T	T	B	S						S	S	T	T							T	T	.	.	.	.						S	S	T	T	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.
		238	.	240	.																				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	T	W	T	G	K	E	N	V	I	Y	N	G	V	T	D	W	V	Y	E	E	E	V	F	S	A	Y	S	A	L	W	W	S	P	N	G	T	F	L	A	Y	A	Q	F	N	D	T	E	V	P	L	I	E	Y	S	F	Y	S	D	E	S	L	Q	Y	P	K	T	V	R	I	P	Y	P	K	A	G	A	E	N
Template Known Secondary structure					S			B	T	T	T				S	B									T	T	S	S	S	B						T	T	S	S										T	T	S										S	T	T		S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.													.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query SS confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query Sequence		.	.	.	.	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	.	.	.	.	.	.	.	.	.	.	.	.	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	.
Query Conservation		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Conservation
Template Sequence		P	T	V	K	F	F	V	V	D	T	R	T	L	S	P	N	A	S	V	T	S	Y	Q	I	V	P	P	A	S	V	L	I	G	D	H	Y	L	C	G	V	T	W	V	T	E	E	R	I	S	L	Q	W	I	R	R	A	Q	N	Y	S	I	I	D	I	C	D	Y	D	E	S	T	G	R	W	I	S	S	V	A	R
Template Known Secondary structure											G	G	G			T	T	S															T	S												T	T									T	T	S	S											T	T	T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
																333	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	Q	D	A	D	V	S	S	D	G	K	F	.	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		Q	H	I	E	I	S	T	T	G	W	V	G	R	F	R	P	A	E	P	H	F	T	S	D	G	N	S	F	Y	K	I	I	S	N	E	E	G	Y	K	H	I	C	H	F	Q	T	D	K	S	N	C	T	F	I	T	K	G	A	W	E	V	I	G	I	E	A	L	T	S	D	Y	L	Y	Y	I	S	N	E	H	K
Template Known Secondary structure								S	S	S		S	S	S	S	S								T	T	S	S									T	T	S									T	T		S					S			S	S	S										S	S							S		G	G
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
						398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.						.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																	.	.	.	.	.
Query SS confidence		.	.	.	.																	.	.	.	.	.
Query Sequence		.	.	.	.	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	.	.	.	.	.	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation		.	.	.	.																	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		G	M	P	G	G	R	N	L	Y	R	I	Q	L	N	D	Y	T	K	V	T	C	L	S	C	E	L	N	P	E	R	C	Q	Y	Y	S	A	S	F	S	N
Template Known Secondary structure		G		T	T		B							T	T								S	S	T	T	T	S	T	T	T	B		B							T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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