Job Description P0A855 Confidence 99.46% Date Thu Jan 5 11:06:56 GMT 2012 Rank 96 Aligned Residues 229 % Identity 9% Template d1nexb2 SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	.	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N
Query Conservation																																															.
Alig confidence																				.													.	.	.												.																					.	.
Template Conservation																				.													.	.	.																																	.	.
Template Sequence		Q	R	T	T	L	R	G	H	X	T	S	V	I	T	C	L	Q	F	.	E	D	N	Y	V	I	T	G	A	D	D	K	.	.	.	X	I	R	V	Y	D	S	I	N	K	K	F	L	L	Q	L	S	G	H	D	G	G	V	W	A	L	K	Y	A	H	G	G	.	.	I	L	V	S	G	S	T	D	R	T	V	R
Template Known Secondary structure										S	S	S								.		T	T							T	T	T	.	.	.							T	T	T	T										S	S									T	T	T	.	.							T	T
Template Predicted Secondary structure																				.													.	.	.																																	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.				.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	D	I	K	K	G	C	C	T	H	V	F	E	G	H	N	S	T	V	R	C	L	D	I	V	E	Y	K	N	I	K	Y	I	V	T	G	S	R	D	N	T	L	H	V	W	K	L	P	K	D	Y	P	L	V	F	H	T	P	E	E	N	P	Y	F	V	G	V	L	R	G	H	X	A	S	V	R	T	V	S
Template Known Secondary structure					T	T	T	T										S	S											T	T									T	T	S																S		T	T	T		T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
																				317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	G	N	I	V	V	S	G	S	Y	D	N	T	L	I	V	W	D	V	A	Q	X	K	C	L	Y	I	L	S	G	H	T	D	R	I	Y	S	T	I	Y	D	H	E	R	K	R	C	I	S	A	S	X	D	T	T	I	R	I	W	D	L	E	N	G	E	L	X	Y	T	L	Q	G	H	T	A	L	V	G	L
Template Known Secondary structure				T	T							T	T	S							T	T	T	T										S	S									T	T	T	T							T	T	S							T	T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
														354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	.	.	A	R	L	P	A	T	D	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.													.	.
Template Conservation																																																									.	.	.
Template Sequence		L	R	L	S	D	K	F	L	V	S	A	A	A	D	G	S	I	R	G	W	D	A	N	D	Y	S	R	K	F	S	Y	H	H	T	N	L	S	A	I	T	T	F	Y	V	S	D	N	I	L	V	S	G	S	E	N	.	.	.	Q	F	N	I	Y	N	L	R	S	G	K	L	V	H	A	N	I	L	K	D	A	D
Template Known Secondary structure						S	S							T	T	S							T	T	T										T	T											S	S							T	T	.	.	.							T	T	T			B			S		T	T	T	T		S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.				.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
		420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	K	F	P	A	W	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	W	S	V	N	F	K	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		715	.	.	.	.	720	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions