Job Description P0A855 Confidence 99.83% Date Thu Jan 5 11:06:56 GMT 2012 Rank 28 Aligned Residues 256 % Identity 11% Template c3u4yA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown protein (dtox_1751)2 from desulfotomaculum acetoxidans dsm 771. Resolution 2.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	.	.	A	V	R	Q	V	A	S	F
Query Conservation																																																																								.	.
Alig confidence														.	.	.	.																																											.	.											.	.
Template Conservation														.	.	.	.																																											.	.
Template Sequence		S	N	F	G	I	V	V	E	Q	H	L	R	.	.	.	.	R	I	S	F	F	S	T	D	T	L	E	I	L	N	Q	I	T	L	G	Y	D	F	V	D	T	A	I	T	S	D	C	S	N	V	V	V	T	S	D	F	C	Q	.	.	T	L	V	Q	I	E	T	Q	L	E	P	P	K	V	V	A	I	Q	E	G
Template Known Secondary structure										G	G	G	T	.	.	.	.							T	T	T																				S	S	S								S	T	T		.	.								S	S	S	S
Template Predicted Secondary structure														.	.	.	.																																											.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	S	X	A	D	V	D	I	T	P	D	D	Q	F	A	V	T	V	T	G	L	N	H	P	F	N	X	Q	S	Y	S	F	L	K	N	K	F	I	S	T	I	P	I	P	Y	D	A	V	G	I	A	I	S	P	N	G	N	G	L	I	L	I	D	R	S	S	A	N	T	V	R	R	F	K	I	D	A	D	G
Template Known Secondary structure		S	S									T	T	S	S								S	S	S	S								T	T	T	T										T	T								T	T	S	S								T	T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		323	.					.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																											.	.
Query SS confidence				.	.	.	.																																											.	.
Query Sequence		A	P	.	.	.	.	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	.	.	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G
Query Conservation				.	.	.	.																																											.	.
Alig confidence				.	.	.	.																																											.	.
Template Conservation
Template Sequence		V	L	F	D	T	G	Q	E	F	I	S	G	G	T	R	P	F	N	I	T	F	T	P	D	G	N	F	A	F	V	A	N	L	I	G	N	S	I	G	I	L	E	T	Q	N	P	E	N	I	T	L	L	N	A	V	G	T	N	N	L	P	G	T	I	V	V	S	R	D	G	S	T	V	Y	V	L	T	E	S	T
Template Known Secondary structure													S	S	S	S								T	T	S	S							T	T	T	T								S	S	T	T	S										S	S									T	T	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420											.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	.	.	.	.	.	.	.	.	.	.	V	K	F	P	A	W	S	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	D	V	F	N	F	N	Q	L	S	G	T	L	S	F	V	K	S	F	G	H	G	L	L	I	D	P	R	P	L	F	G	A	N	Q	X	A	L	N	K
Template Known Secondary structure		.	.								T	T	T	T																	G	G	G	T	T								T
Template Predicted Secondary structure		.	.
Template SS confidence
				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions