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Job DescriptionP0A855
Confidence99.46%DateThu Jan 5 11:06:56 GMT 2012
Rank97Aligned Residues238
% Identity8%Templatec3sbrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:nitrous-oxide reductase; PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190........ .200.........210.........220...
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Query Sequence  KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS. . PQPLMSPAWSPDGSKLAYVTFESGR. . . . . . . . . . . . . .
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Template Sequence  DGKYDGKYLFINDKANS. . . . RVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQD
Template Known Secondary structure  TTTTTT....TTTT
TT


SSB


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   137..140.........150... ......160.........170.........180.........190.........200.........210..
 
   224.....230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  . . . . SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDS
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Template Sequence  ENSYTMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFD. . LGGMMRNERDWVVVFDIHAVEAAVKAG
Template Known Secondary structure  TTTTT
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SSSSS
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SS..T
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   213......220.........230.........240.........250.........260... ......270.........280.........290
 
   300.........310.........320.........330.........340.........350.........360.. .....
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Query Sequence  QNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD. . . . . . . . . . . . LATGG
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Template Sequence  DFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI
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TT




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BTTB

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TTS

TTSSBGGGTT

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GGGG
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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   368.370.........380.........390.........400......
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Query Sequence  VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST
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Template Sequence  VGEPELGLGPLHTTFDGRGNAYTTLFIDS. . . QVVKWNM
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B

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   371........380.........390......... 400......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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