Job Description P0A855 Confidence 99.45% Date Thu Jan 5 11:06:56 GMT 2012 Rank 100 Aligned Residues 227 % Identity 15% Template c3ow8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61 Resolution 2.30 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	.	.	.	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T
Query Conservation																																																	.	.	.
Alig confidence																					.	.	.												.	.	.												.	.	.
Template Conservation																					.	.	.												.	.	.
Template Sequence		G	I	L	F	K	Q	E	Q	A	H	D	D	A	I	W	S	V	A	W	.	.	.	G	E	T	V	V	T	G	S	L	D	D	.	.	.	L	V	K	V	W	K	W	R	D	E	R	L	D	L	Q	W	S	L	E	G	H	Q	L	G	V	V	S	V	D	I	S	H	T	L	P	I	A	A	S	S	S	L	D	A
Template Known Secondary structure								T	T	S	S	S	S								.	.	.									T	T	S	.	.	.									T	T												S	S									S	S	S	S							T	T	S
Template Predicted Secondary structure																					.	.	.												.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	I	R	L	W	D	L	E	N	G	K	Q	I	K	S	I	D	A	G	P	V	D	A	W	T	L	A	F	S	P	D	S	Q	Y	L	A	T	G	T	H	V	G	K	V	N	I	F	G	V	E	S	G	K	K	E	Y	S	L	D	T	R	G	K	F	I	L	S	I	A	Y	S	P	D	G	K	Y	L
Template Known Secondary structure		.	.	.							T	T	T	T										T	T									T	T	S	S							T	T	S							T	T	T		S								S	S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
														317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																													.
Template Sequence		A	S	G	A	I	D	G	I	I	N	I	F	D	I	A	T	G	K	L	L	H	T	L	E	G	H	A	M	P	I	R	S	L	T	F	S	P	D	S	Q	L	L	V	.	T	A	S	D	D	G	Y	I	K	I	Y	D	V	Q	H	A	N	L	A	G	T	L	S	G	H	A	S	W	V	L	N	V	A	F	C	P
Template Known Secondary structure						T	T	S							T	T	T	T										S	S									T	T	S					.				T	T	S							T	T	T											S	S									T
Template Predicted Secondary structure																																													.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	.	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation																								.
Alig confidence														.	.	.								.
Template Conservation														.	.	.
Template Sequence		D	D	T	H	F	V	S	S	S	S	D	K	.	.	.	S	V	K	V	W	D	V	G	T	R	T	C	V	H	T	F	F	D	H	Q	D	Q	V	W	G	V	K	Y	N	G
Template Known Secondary structure		T	S	S							T	T	S	.	.	.							T	T	T	T										S	S									T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions