Job Description P0A855 Confidence 90.34% Date Thu Jan 5 11:06:56 GMT 2012 Rank 167 Aligned Residues 195 % Identity 12% Template c3ottB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two-component system sensor histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative one2 component system bt4673 from b. thetaiotaomicron Resolution 2.30 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.														.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		T	Y	N	T	N	W	T	Y	Y	I	F	E	D	T	A	G	Q	L	W	I	S	T	C	L	G	G	.	.	.	.	I	F	V	V	D	K	H	K	L	M	Q	S	T	S	G	Q	Y	I	A	E	Q	N	Y	S	V	H	N	G	L	S	G	M	F	I	N	Q	I	I	P	D	N	E	G	N	V	W	V	L	L	Y
Template Known Secondary structure				B		S	S								T	T	S							S	S	S		.	.	.	.														S	S	S				S					T	T	T	T		S		S									S	S	S							T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.					.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	.	.	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S
Query Conservation																														.	.
Alig confidence						.	.	.																						.	.																					.	.	.
Template Conservation						.	.	.																																												.	.	.
Template Sequence		N	N	K	G	.	.	.	I	D	K	I	N	P	R	T	R	E	V	T	K	L	F	A	D	E	L	T	G	E	K	S	P	N	Y	L	L	C	D	E	D	G	L	L	W	V	G	F	H	G	G	.	.	.	V	M	R	I	N	P	K	D	E	S	Q	Q	S	I	S	F	G	S	F	S	N	N	E	I	L	S	M
Template Known Secondary structure		T		S	S	.	.	.						T	T	T	T						S	T	T	T	S	S	G	G	G									T	T	S							T	T		.	.	.						T	T	T	T								S	S		S	S
Template Predicted Secondary structure						.	.	.																																												.	.	.
Template SS confidence
		518	.	520	.				.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.				.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D
Query Conservation
Alig confidence																.	.	.																																								.	.	.	.
Template Conservation																.	.	.																																								.	.	.	.
Template Sequence		T	C	V	K	N	S	I	W	V	S	T	T	N	G	.	.	.	L	W	I	I	D	R	K	T	M	D	A	R	Q	Q	N	T	N	K	R	F	T	S	L	L	F	D	P	K	E	D	C	V	Y	L	G	G	A	D	G	.	.	.	.	F	G	I	S	H	S	N
Template Known Secondary structure					T	T							T	T		.	.	.						T	T	T													S						T	T	T	T							B	T		.	.	.	.						T	T
Template Predicted Secondary structure																.	.	.																																								.	.	.	.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.	.	.	.	.				.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.					.	.	.	.	.	650	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions