Job Description P0A855 Confidence 93.03% Date Thu Jan 5 11:06:56 GMT 2012 Rank 166 Aligned Residues 120 % Identity 15% Template c3ly8A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:transcriptional activator cadc; PDBTitle: crystal structure of mutant d471e of the periplasmic domain of cadc Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	R	I	V	I	D	S	G	V	D	S	G	R	P	I	G	V	V	P	F	Q	W	A	G	P	G	A	A	P	E	D	I	G	G	I	V	A	A	D	L	R	N	S	G	K	F	N	P	L	D	R	A	R	L	P	Q	Q	P	G	S	A	Q	E	V	Q	P	A	A	W	S	A	L	G	I	D	A	V	V	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		D	I	D	I	N	M	V	N	K	S	C	N	S	W	.	.	.	.	.	.	.	S	S	P	Y	Q	L	S	Y	A	I	G	V	G	D	L	V	A	T	S	L	N	T	F	S	T	F	M	V	H	D	K	I	N	Y	N	I	D	E	P	S	S	S	G	.	.	.	.	.	.	K	T	L	S	I	A	F	V	N	Q
Template Known Secondary structure										S	S	S	S	S	S	.	.	.	.	.	.	.			T	T																				S	S							T	T											.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	T	P	N	P	D	G	S	Y	N	V	A	Y	Q	L	V	D	T	G	G	A	P	G	T	V	L	A	Q	N	S	Y	K	V	N	K	Q	W	L	R	Y	A	G	H	T	A	S	D	E	V	F	E	K	L	T	G	I
Query Conservation
Alig confidence						.	.	.																.	.
Template Conservation						.	.	.																.	.
Template Sequence		R	Q	Y	R	.	.	.	A	Q	Q	C	F	M	S	I	K	L	V	D	N	A	D	.	.	G	S	T	M	L	D	K	R	Y	V	I	T	N	G	N	Q	L	A	I	Q	N	D	L	L	E	S	L	S	K	A	L	N	Q	P
Template Known Secondary structure			S	S	T	.	.	.	T												T	T	T	.	.													S	S	T																T	T
Template Predicted Secondary structure						.	.	.																.	.
Template SS confidence
		265	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions