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Job DescriptionP0A855
Confidence95.57%DateThu Jan 5 11:06:56 GMT 2012
Rank164Aligned Residues236
% Identity11%Templatec3fw0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:peptidyl-glycine alpha-amidating monooxygenase; PDBTitle: structure of peptidyl-alpha-hydroxyglycine alpha-amidating2 lyase (pal) bound to alpha-hydroxyhippuric acid (non-3 peptidic substrate)
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170....... ..180.........190......... 200.........210.........220.....
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Query Sequence  AYVVQTNGGQ. . . . . . . . . . . . . . . . . . . . FPYELRVSDYDGYNQFVVHRSP. . QPLMSPAWSPDGSKLAYVTFESGRSA
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Template Sequence  LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALH. . . Q
Template Known Secondary structure 
TT



TTTB
TT

BS
GGG
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TTT


TTT
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TTTT...
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   528.530.........540.........550.........560.........570.........580.........590.........600... .
 
   226...230.........240..... ....250.........260... ......270.........280.....
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Query Sequence  LVIQTLANGAVRQVASFPRH. . . . . . . . . . . NGAPAFSPDGSKLAFALS. . . . . . . . . KTGSLNLYVMDLASGQIRQVTD
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Template Sequence  VFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPG
Template Known Secondary structure 
TT
SS

S
TT


SSTT

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TTT


SS


TT




SSS

TT
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   605....610.........620.........630.........640.........650.........660.........670.........680....
 
   286...290.........300.........310.........320.........330.........340.........350. ........360.
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Query Sequence  GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS. . . . NGGQQHIAKQ
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Template Sequence  QFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM
Template Known Secondary structure  SSTTTTGGGTTTT



GGGTT
TT



TT
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   685....690.........700.........710.........720.........730.........740.........750.........760....
 
   362.......370.... .....380.........390.........400.........
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Query Sequence  DLATGGVQVLSST. . . . . FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR
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Template Sequence  NFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYI. . . GDAHTNTVWKFTLTEK
Template Known Secondary structure  TTT



SSS

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   765....770.........780.........790........ .800.........810....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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