Job Description P0A855 Confidence 99.56% Date Thu Jan 5 11:06:56 GMT 2012 Rank 84 Aligned Residues 230 % Identity 17% Template c3fm0A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1 Resolution 1.70 Å

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		192	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure											.																																							.	.	.	.
Query SS confidence											.																																							.	.	.	.
Query Sequence		Q	F	V	V	H	R	S	P	Q	.	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	.	.	.	.	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G
Query Conservation											.																																							.	.	.	.
Alig confidence											.																						.	.	.															.	.	.	.																						.
Template Conservation																																	.	.	.																																								.
Template Sequence		L	G	R	V	P	A	H	P	D	S	R	C	W	F	L	A	W	N	P	A	G	T	L	L	A	S	C	G	G	D	R	.	.	.	R	I	R	I	W	G	T	E	G	D	S	W	I	C	K	S	V	L	S	E	G	H	Q	R	T	V	R	K	V	A	W	S	P	C	G	N	Y	L	A	.	S	A	S	F	D	A
Template Known Secondary structure								S	T	T	S									T	T	S	S							T	T	S	.	.	.									T	T										S	S		S	S									T	T	S	S				.				T	T	S
Template Predicted Secondary structure																																	.	.	.																																								.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	C	I	W	K	K	N	Q	D	F	E	C	V	T	T	L	E	G	H	E	N	E	V	K	S	V	A	W	A	P	S	G	N	L	L	A	T	C	S	R	D	K	S	V	W	V	W	E	V	D	E	E	D	E	Y	E	C	V	S	V	L	N	S	H	T	Q	D	V	K	H	V	V	W	H	P	S	Q	E	L
Template Known Secondary structure																						S	S									T	T	S	S							T	T	S									T	T	S													S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	S	A	S	Y	D	D	T	V	K	L	Y	R	E	E	E	D	D	W	V	C	C	A	T	L	E	G	H	E	S	T	V	W	S	L	A	F	D	P	S	G	Q	R	L	A	S	C	S	D	D	R	T	V	R	I	W	R	Q	Y	L	P	G	N	E	Q	G	V	A	C	S	P	S	W	K	C	I	C	T	L
Template Known Secondary structure							T	T	S									T	T												S	S									T	T	S	S							T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
				372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410											.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	.	.	.	.	.	.	.	.	.	.	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation		.	.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																										.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		S	G	F	H	S	R	T	I	Y	D	I	A	W	C	Q	L	T	G	A	L	A	T	A	C	G	D	D	.	.	.	A	I	R	V	F	Q	E	D	P	N	S	D	P	Q	Q	P	T	F	S	L	T	A	H	L	H	Q	A	H	S	Q	D	V	N	C	V	A	W	N	P
Template Known Secondary structure			S	S		S	S									T	T	T								T	T	S	.	.	.									T	T	S		T	T	S										T	T	S	S	S	S									S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions