Phyre 2 alignment of P0A855 with c3fgbB

Job Description P0A855
Confidence 99.86% Date Thu Jan 5 11:06:56 GMT 2012

Rank 25 Aligned Residues 256

% Identity 18% Template c3fgbB_

PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn; PDBTitle: crystal structure of the q89zh8_bactn protein from2 bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr289b.

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240
Predicted Secondary structure																						.	.	.																																					.	.	.																.
Query SS confidence																						.	.	.																																					.	.	.																.
Query Sequence	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	.	.	.	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	.	.	.	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	.	A
Query Conservation																						.	.	.																																					.	.	.																.
Alig confidence											.											.	.	.																																					.	.	.																.
Template Conservation											.
Template Sequence	X	I	V	G	T	Y	T	S	G	D	.	S	K	G	L	Y	S	F	R	F	N	E	E	N	G	T	A	T	A	L	S	E	A	E	V	E	N	P	S	Y	L	V	P	S	A	D	G	K	F	I	Y	A	V	S	E	F	S	N	E	Q	A	A	A	N	A	F	A	F	N	K	E	E	G	T	F	R	L	L	N	T
Template Known Secondary structure								S	S	S	.											T	T	T												S									S	S	S	S									S	S	T	T										T	T	T	T
Template Predicted Secondary structure											.
Template SS confidence
	38	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.														.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	Q	K	T	G	G	E	D	P	C	Y	I	I	T	N	G	S	N	V	V	T	A	N	Y	S	G	G	S	I	S	V	F	P	I	D	K	D	G	S	L	L	P	A	S	E	V	V	K	F	K	G	S	G	A	D	K	E	R	Q	E	K	P	H	L	H	C	V	R	I	T	P	D	G	K	Y	L	F	A	D	D	L
Template Known Secondary structure				S	S	S									S	S							T	T	T	T							B		T	T	S		B		S												S	S	T	T	T		S	S										T	T	S	S							T
Template Predicted Secondary structure
Template SS confidence
	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

	308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	G	T	D	Q	I	H	K	F	I	V	N	P	N	A	K	A	D	N	E	D	V	F	L	K	E	G	S	P	A	S	Y	K	V	E	A	G	S	G	P	R	H	L	T	F	A	P	N	G	S	Y	A	Y	L	I	N	E	L	S	G	T	V	I	A	F	E	Y	N	D	G	E	L	K	E	I	Q	T	I	A	A	D
Template Known Secondary structure	T	T	T									T	T			T	T	S				S													T	T										T	T	S	S							T	T	T										T	T										S
Template Predicted Secondary structure
Template SS confidence
	197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

	328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																										.																				.	.	.
Query SS confidence																										.																				.	.	.
Query Sequence	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	.	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	.	.	.	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L
Query Conservation																										.																				.	.	.
Alig confidence																										.																				.	.	.
Template Conservation
Template Sequence	T	V	G	A	K	G	S	G	D	I	H	I	S	P	D	G	K	F	L	Y	A	S	N	R	L	K	A	D	G	L	A	I	F	S	I	H	P	E	N	G	X	L	T	K	V	G	Y	Q	L	T	G	I	H	P	R	N	F	I	I	T	P	N	G	K	Y	L	L	V	A	C	R	D	S	N	V	I	Q	V	Y	E
Template Known Secondary structure	S	S												T	T	S	S								S	S	S										T	T	T												S	S									T	T	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

	404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence	R	D	T	D	T	G	L	L	T	D	I	.	R	K	D	I	K	V	D	K	P	V
Template Known Secondary structure			T	T	T							.	S						S	S
Template Predicted Secondary structure												.
Template SS confidence
	357	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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