Job Description P0A855 Confidence 99.48% Date Thu Jan 5 11:06:56 GMT 2012 Rank 94 Aligned Residues 225 % Identity 12% Template c3dwlH_ PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G
Query Conservation																																																						.	.	.
Alig confidence																																		.	.	.																		.	.	.																			.	.	.
Template Conservation																																		.	.	.																																							.	.	.
Template Sequence		A	T	S	Q	V	L	H	I	L	P	K	P	S	Y	E	H	A	F	N	S	Q	R	T	E	F	V	T	T	T	A	T	N	.	.	.	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	V	.	.	.	T	C	S	Q
Template Known Secondary structure											S	S			S						S	S	S	S							S	S	S	.	.	.		B							T	T								B				S	S									T	T	T					.	.	.				T
Template Predicted Secondary structure																																		.	.	.																																							.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M
Query Conservation
Alig confidence																.	.																											.	.
Template Conservation																.	.																											.	.
Template Sequence		D	R	N	A	Y	V	Y	T	W	K	Q	T	L	V	.	.	L	L	R	L	N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	S	G	A	.	.	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	R	P	L	R	S	T	I	L	S	L	D	W	H	P	N	N	V	L	L
Template Known Secondary structure		T	S	S												.	.					S	S									T	T	S	S							S	S	.	.	S							B			B							S	S			S									T	T	S	S
Template Predicted Secondary structure																.	.																											.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.											.
Template Conservation			.																																																																	.	.	.
Template Sequence		A	.	A	G	C	A	D	R	K	A	Y	V	L	S	A	Y	V	R	D	V	D	K	P	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	S	G	N	A	L	A	Y	A	G	H	D	S	.	.	.	S	V	T	I	A	Y	P	S	A	P	E
Template Known Secondary structure			.				S	S	S										T	T						S		S	S		S														S	S	S								T	T	S	S							T	T	T	.	.	.									S	T	T
Template Predicted Secondary structure			.																																																																	.	.	.
Template SS confidence
		162		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.
						410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		Q	P	P	R	A	L	I	T	V	K	L	S	Q	L	P	L	R	S	L	L	W	A	N
Template Known Secondary structure		S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions