Job Description P0A855 Confidence 99.87% Date Thu Jan 5 11:06:56 GMT 2012 Rank 24 Aligned Residues 247 % Identity 16% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																																																	.
Query SS confidence																											.	.	.	.	.	.																																																	.
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	.	.	.	.	.	.	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	.
Query Conservation																											.	.	.	.	.	.																																																	.
Alig confidence														.	.	.	.	.									.	.	.	.	.	.																																		.	.	.													.
Template Conservation														.	.	.	.	.																																																.	.	.
Template Sequence		N	A	D	I	I	V	S	A	S	R	D	K	.	.	.	.	.	S	I	I	L	W	K	L	T	K	D	D	K	A	Y	G	V	A	Q	R	R	L	T	G	H	S	H	F	V	E	D	V	V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D	G	.	.	.	E	L	R	L	W	D	L	A	A	G	V	S	T
Template Known Secondary structure				S							T	T	S	.	.	.	.	.										S	T	T		S											S	S									T	T	S	S							T	T	S	.	.	.							T	T	T	T
Template Predicted Secondary structure														.	.	.	.	.																																																.	.	.
Template SS confidence
		1027	.	.	1030	.	.	.	.	.	.	.	.						.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.				.	.	.	.	1090	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	.	.	.	.	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P
Query Conservation																																																								.	.	.	.
Alig confidence																															.	.	.																							.	.	.	.
Template Conservation																															.	.	.
Template Sequence		R	R	F	V	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	R	D	R	.	.	.	T	I	K	L	W	N	T	L	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T
Template Known Secondary structure								S	S									T	T	S	S							T	T	S	.	.	.							T	T	S								S	S	T	T	S		S	S									S		S	S	S								T	T	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.				.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y
Query Conservation																																																									.
Alig confidence																																												.	.	.											.
Template Conservation																																												.	.	.
Template Sequence		V	K	V	W	N	L	S	N	C	K	L	R	S	T	L	A	G	H	T	G	Y	V	S	T	V	A	V	S	P	D	G	S	L	C	A	S	G	G	K	D	G	V	.	.	.	V	L	L	W	D	L	A	E	G	K	K	L	Y	S	L	E	A	N	S	V	I	H	A	L	C	F	S	P	N	R	Y	W	L	C	A
Template Known Secondary structure							T	T	T											S	S									T	T	S	S							T	T	S	B	.	.	.						T	T	T	T							B		S	S									S	S	S	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		1176	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.				.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.														.	.	.
Query SS confidence																	.														.	.	.
Query Sequence		S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	.	D	G	R	F	K	A	R	L	P	A	T	D	G	.	.	.	Q	V	K	F	P	A	W	S	P
Query Conservation																	.														.	.	.
Alig confidence							.	.	.	.							.														.	.	.
Template Conservation							.	.	.	.
Template Sequence		A	T	E	H	G	.	.	.	.	I	K	I	W	D	L	E	S	K	S	I	V	E	D	L	K	V	D	L	K	K	V	I	Y	C	T	S	L	N	W	S	A
Template Known Secondary structure				T	T		.	.	.	.						T	T	T	T																							T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		1253	.	.	.	.					.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions