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Job DescriptionP0A855
Confidence99.00%DateThu Jan 5 11:06:56 GMT 2012
Rank135Aligned Residues231
% Identity15%Templatec3dasA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the pqq-bound form of aldose sugar2 dehydrogenase (adh) from streptomyces coelicolor
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA. . . . . . . SFPRHNGAPAFSPDG. . . . . . . . .
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Template Sequence  LRTVATGLNSPWGLAPLPGGDLLVSSRDEA. . . TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHXVYAY
Template Known Secondary structure 


SS
TTS
TTT
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TTT


TT


BTTBS
TT
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   24.....30.........40.........50... ......60.........70.........80.........90.........100
 
   256...260.........270.........280.........290.........300.........310.........320....
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Query Sequence  . . . . . . . SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP. . . .
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Template Sequence  FTSASDNRIVRXLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKXLYAGTGESGDTGLSQDRKSLGGKILRXT
Template Known Secondary structure 
SSSB
TTS
TT

B





SS





TTS

B
TT
GGGTT
TT
STT

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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   325....330.........340.........350.........360..... ....370...
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Query Sequence  . . . . . . . . . . . . . . QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT. . . . . . . . . . . . . . . . . GGVQVLSS
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Template Sequence  PDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST
Template Known Secondary structure  TTSSB
TT
SSTT

B

SB


TT



SSS

TT
B

TTT

SS


TT



S
T
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   374.....380.........390.........400......... 410.........420........
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Query Sequence  TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR. . . . . FKARLPATDGQVKFPAWSP
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Template Sequence  DEASPSGIAYAEGSVWXAGLRGE. . . RLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG
Template Known Secondary structure  TT

TTSTT
...STTSS

STTTSS
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   261........270.........280... ......290.........300.........310.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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