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Job DescriptionP0A855
Confidence99.79%DateThu Jan 5 11:06:56 GMT 2012
Rank39Aligned Residues263
% Identity13%Templatec3c75J_
PDB info PDB header:oxidoreductaseChain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180....... ..190.........200.........210......... 220.........230.....
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Query Sequence  RTRIAYVVQTNGGQFPYELRVSDY. DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTF. . . . . . . ESGRSALVIQTLANGA
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Template Sequence  DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP. . HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL
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TT
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   83......90.........100.........110.........120. ........130.........140.........150.........160
 
   236...240. ........250.........260.........270.........280......
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Query Sequence  VRQVAS. . . . . . . . FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PIADIELPDAPRFLVGTYQWMNALTPDNKNLL. FYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG
Template Known Secondary structure  TT





S

GGGS
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   161........170.........180.........190.. .......200.........210.........220.........230.........
 
   287..290.........300.........310.........320.........330..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS
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Template Sequence  SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   333......340.........350.. .......360....... ..370.........380.........390.........400....
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Query Sequence  QNQDADVSSDGKFMVMVSSN. . . . . . . GGQQHIAKQDLATGG. VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLV
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Template Sequence  GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALS. AGTQTLHIY
Template Known Secondary structure  SSS
TTTT

TT
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   320.........330.........340.........350.........360.........370.........380......... 390........
 
   405....410.........420.........430
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Query Sequence  STDGRFKARLPATDGQVKFPAWSPYL
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Template Sequence  DAATGEELRSVDQLGRGPQIITTHDM
Template Known Secondary structure  TTT




SSS





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   399400.........410.........420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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