Job Description P0A855 Confidence 99.79% Date Thu Jan 5 11:06:56 GMT 2012 Rank 39 Aligned Residues 263 % Identity 13% Template c3c75J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin Resolution 2.50 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																										.																																	.	.	.	.	.	.	.
Query SS confidence																										.																																	.	.	.	.	.	.	.
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	.	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	.	.	.	.	.	.	.	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A
Query Conservation																										.																																	.	.	.	.	.	.	.
Alig confidence																										.															.	.																	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		D	A	R	R	V	Y	I	Q	D	P	A	H	F	A	A	I	T	Q	Q	F	V	I	D	G	S	T	G	R	I	L	G	M	T	D	G	G	F	L	P	.	.	H	P	V	A	A	E	D	G	S	F	F	A	Q	A	S	T	V	F	E	R	I	A	R	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F	L
Template Known Secondary structure			T	T								T	T	T		S	S								T	T	T	T										S	S		.	.						T	T	S	S												T	T													T	T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		236	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	Q	V	A	S	.	.	.	.	.	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		P	I	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	Q	W	M	N	A	L	T	P	D	N	K	N	L	L	.	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	T	F	D	R	M	L	D	V	P	D	C	Y	H	I	F	P	A	S	P	T	V	F	Y	M	N	C	R	D	G
Template Known Secondary structure									T	T							S			G	G	G	S				T	T	S	S				.					S	S	S								T	T	T	T										S									T	T							T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
																																				287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	A	R	V	D	F	A	D	G	E	T	K	V	T	N	T	E	V	F	H	T	E	D	E	L	L	I	N	H	P	A	F	S	L	R	S	G	R	L	V	W	P	T	Y	T	G	K	I	F	Q	A	D	L	T	A	E	G	A	T	F	R	A	P	I	E	A	L	T	E	A	E	R	A	D	D	W	R	P	G
Template Known Secondary structure		S								T	T											S		T	T	S		B		S						T	T	T							B	T	T	S									S	S										S	S		T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.																.
Query SS confidence																						.	.	.	.	.	.	.																.
Query Sequence		Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	.	.	.	.	.	.	.	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V
Query Conservation																						.	.	.	.	.	.	.																.
Alig confidence																						.	.	.	.	.	.	.																.																												.
Template Conservation																																																																								.
Template Sequence		G	W	Q	Q	T	A	Y	H	R	Q	S	D	R	I	Y	L	L	V	D	Q	R	D	E	W	K	H	K	A	A	S	R	F	V	V	V	L	N	A	E	T	G	E	R	I	N	K	I	E	L	G	H	E	I	D	S	I	N	V	S	Q	D	A	E	P	L	L	Y	A	L	S	.	A	G	T	Q	T	L	H	I	Y
Template Known Secondary structure		S	S	S						T	T	T	T											T	T		T	T	S										T	T	T																					S	S	S								.	T	T	T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	A	T	G	E	E	L	R	S	V	D	Q	L	G	R	G	P	Q	I	I	T	T	H	D	M
Template Known Secondary structure			T	T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions