Job Description P0A855 Confidence 99.88% Date Thu Jan 5 11:06:56 GMT 2012 Rank 22 Aligned Residues 254 % Identity 10% Template c3bwsA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:protein lp49; PDBTitle: crystal structure of the leptospiral antigen lp49 Resolution 1.99 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.
Predicted Secondary structure																																			.	.	.	.	.	.																																								.
Query SS confidence																																			.	.	.	.	.	.																																								.
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	.	.	.	.	.	.	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	.	V
Query Conservation																																			.	.	.	.	.	.																																								.
Alig confidence														.	.	.	.	.																	.	.	.	.	.	.																										.	.	.												.
Template Conservation														.	.	.	.	.																																																.	.	.
Template Sequence		N	T	R	L	A	I	P	L	L	E	D	E	.	.	.	.	.	G	X	D	V	L	D	I	N	S	G	Q	T	V	R	L	S	P	P	E	K	Y	K	K	K	L	G	F	V	E	T	I	S	I	P	E	H	N	E	L	W	V	S	Q	X	Q	A	N	.	.	.	A	V	H	V	F	D	L	K	T	L	A	Y	K
Template Known Secondary structure		S	S						B	T	T	S	S	.	.	.	.	.	S						T	T	T														T	T										G	G	G	T							G	G	G	T	.	.	.							T	T	T
Template Predicted Secondary structure														.	.	.	.	.																																																.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																.	.																																												.	.	.	.	.
Template Conservation																																.	.
Template Sequence		A	T	V	D	L	T	G	K	W	S	K	I	L	L	Y	D	P	I	R	D	L	V	Y	C	S	N	W	I	S	E	.	.	D	I	S	V	I	D	R	K	T	K	L	E	I	R	K	T	D	K	I	G	L	P	R	G	L	L	L	S	K	D	G	K	E	L	Y	I	A	Q	F	S	A	S	N	Q	E	S	G	G
Template Known Secondary structure							S	S	S	S								T	T	T	T							T	T	T	T	.	.							T	T	T	T										S									T	T	S	S									S		T	T		S
Template Predicted Secondary structure																																.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		G	R	L	G	I	Y	S	X	D	K	E	K	L	I	D	T	I	G	P	P	G	N	K	R	H	I	V	S	G	N	T	E	N	K	I	Y	V	S	D	X	C	C	S	K	I	E	V	Y	D	L	K	.	E	K	K	V	Q	K	S	I	P	V	F	D	K	P	N	T	I	A	L	S	P	D	G	K	Y	L	Y	V
Template Known Secondary structure									T	T	T	T																			S	S	T	T							T	T	T	T							T	T	.	T	T									S	S	S								T	T	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		392	.	.	.	.	.													.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	S	Q	G	M	.	.	.	.	.	.	.	.	.	.	.	.	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	C	R	G	P	N	H	P	T	E	G	Y	L	K	K	G	L	V	L	G	K	V	Y	V	I	D	T	T	T	D	T	V	K	E	F	W	E	A	G	N	Q	P	T	G	L	D	V	S	P
Template Known Secondary structure									T	T	T		T	T	S			S	S									T	T	T	T									S	S	S								T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions