Job Description P0A855 Confidence 97.07% Date Thu Jan 5 11:06:56 GMT 2012 Rank 157 Aligned Residues 243 % Identity 15% Template c3a9gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form Resolution 2.39 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																	.	.										.	.	.	.	.	.
Query SS confidence																															.	.	.	.																	.	.										.	.	.	.	.	.
Query Sequence		A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	.	.	.	.	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	.	.	K	L	A	Y	V	T	F	E	S	.	.	.	.	.	.	G	R	S	A	L	V	I	Q	T	L	A	N	G	A
Query Conservation																															.	.	.	.																	.	.										.	.	.	.	.	.
Alig confidence										.	.	.	.	.																	.	.	.	.																	.	.										.	.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		Y	L	V	T	E	R	P	G	.	.	.	.	.	R	L	V	L	I	S	P	S	G	K	K	L	V	A	S	F	D	V	A	N	V	G	E	A	G	L	L	G	L	A	L	H	P	E	F	P	K	K	S	W	V	Y	L	Y	A	S	Y	F	A	E	G	G	H	I	R	N	R	V	I	R	G	R	L	D	G	S	T
Template Known Secondary structure							T	T	T	.	.	.	.	.							S	S													S	T	T		S								T	T	T	T	T	S												G	G	G													S	S	S
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
							236	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.											.	.	.	.	.	.	270	.	.	.	.	.	.	.	.									.	280	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	V	R	Q	V	A	.	.	.	.	.	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	.	.	.	.	.	.	.	.	.	.	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	.	.	.	.	.	.	.	.	Q	I	R	Q	V	T	D	G	R
Query Conservation		.	.	.	.	.						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	L	K	E	V	K	T	L	I	D	G	I	P	G	A	Y	I	H	N	G	G	R	I	R	F	G	P	D	G	M	L	Y	I	T	T	G	D	A	A	D	P	R	L	A	Q	D	L	S	S	L	A	G	K	I	L	R	V	D	E	E	G	R	P	P	A	D	N	P	F	P	N	S	P	I	W	S	Y	G	H
Template Known Secondary structure																		S	S										T	T	S									T	T		G	G	G	G	T		T	T			S	S							T	T	S				T	T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.																									.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	P	Q	G	I	D	W	H	R	A	S	G	V	M	V	A	T	E	H	G	P	V	G	H	D	E	V	N	I	I	L	K	G	G	N	Y	G	W	P	L	A	T	G	K	A	G	R	G	E	F	V	D	P	V	I	D	T	G	S	E	T	W	A	P	S	G	A	S	F	V	H	G	D	M	F	P	G	L	R
Template Known Secondary structure		S									T	T	T										S	S	S									T	T		B			T	T	T			S					T	T	S				S				T	T													S	S	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	.	.	.	.	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.																															.	.	.
Template Conservation																																																																.	.	.
Template Sequence		G	W	L	L	I	A	C	L	R	G	S	M	L	A	A	V	N	F	G	D	N	M	E	V	R	K	I	S	T	F	F	K	N	V	F	G	R	L	R	D	V	V	I	D	D	D	G	G	I	L	I	S	T	S	N	R	D	G	R	G	S	L	.	.	.	R	A	G	D	D	K	I	L	K	I	V	S	E	Q
Template Known Secondary structure		T							T	T	T	T									G	G	G										T	T	T	S										T	T	S								T	T	S	S	S	S			.	.	.		T	T		S								T	T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions