Job Description P0A855 Confidence 99.66% Date Thu Jan 5 11:06:56 GMT 2012 Rank 64 Aligned Residues 257 % Identity 14% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	.	.	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q
Query Conservation																																																																	.	.
Alig confidence																			.																																														.	.
Template Conservation																			.
Template Sequence		P	P	E	H	D	L	V	A	F	S	V	D	M	S	G	N	E	.	V	Y	T	I	E	F	K	R	I	S	D	P	S	Q	T	I	A	D	K	V	S	G	T	N	G	E	I	V	W	G	P	D	H	T	S	L	F	Y	V	T	K	D	E	T	L	R	E	N	K	V	W	R	H	V	M	G	K	L	Q	S	E	D
Template Known Secondary structure		T	T	T	T									S	S	S	S	S	.									T	T		T	T												S						S	S	T	T									T	T											T	T	S		G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		239	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure				.	.	.	.																																								.	.	.	.
Query SS confidence				.	.	.	.																																								.	.	.	.
Query Sequence		V	A	.	.	.	.	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	.	.	.	.	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G
Query Conservation				.	.	.	.																																								.	.	.	.
Alig confidence				.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		V	C	L	Y	E	E	H	N	P	L	F	S	A	F	M	Y	K	A	A	D	T	N	T	L	C	I	G	S	Q	S	P	E	T	A	E	V	H	L	L	D	L	R	K	G	N	A	H	N	T	L	E	I	V	R	P	R	E	K	G	V	R	Y	D	V	Q	M	H	G	T	S	H	L	V	I	L	T	N	E	G	G
Template Known Secondary structure										T	T									T	T	S	S									S	S									S	S	S		T	T							S	S				T	T									T	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		311	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	Q	V	Y	K	V	N	I	N	G	G	A	.	.	.	.	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	N	H	K	L	L	I	A	P	R	G	Q	P	S	D	W	S	H	V	L	V	D	H	S	E	D	V	F	M	E	S	I	A	V	R	S	N	Y	L	V	V	A	G	R	R	A	G	L	T	R	I	W	T	M	M	A	D	S	Q	D	G	V	F	K	A	G	T	G	L	R	E	V	V	M	E	E	P	I	F
Template Known Secondary structure			T	T								T	T	S	T	T											S	S										S	S									T	T											T	T	T	S				T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
					376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																								.
Query SS confidence		.	.	.																								.
Query Sequence		.	.	.	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	.	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D
Query Conservation		.	.	.																								.
Alig confidence		.	.	.																								.
Template Conservation
Template Sequence		T	V	H	L	V	E	S	Q	M	L	E	Y	E	E	P	T	F	R	M	E	Y	S	S	L	A	T	P	N	T	W	F	D	V	S	P	Q	D	H	S	R	T	A	V	K	V	R	E
Template Known Secondary structure							G	G	G				T	T		S									T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions