Job Description P0A855 Confidence 100.00% Date Thu Jan 5 11:06:56 GMT 2012 Rank 1 Aligned Residues 409 % Identity 100% Template c2w8bB_ PDB info PDB header:protein transport/membrane protein Chain: B: PDB Molecule:protein tolb; PDBTitle: crystal structure of processed tolb in complex with pal Resolution 1.86 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	R	I	V	I	D	S	G	V	D	S	G	R	P	I	G	V	V	P	F	Q	W	A	G	P	G	A	A	P	E	D	I	G	G	I	V	A	A	D	L	R	N	S	G	K	F	N	P	L	D	R	A	R	L	P	Q	Q	P	G	S	A	Q	E	V	Q	P	A	A	W	S	A	L	G	I	D	A	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	R	I	V	I	D	S	G	V	D	S	G	R	P	I	G	V	V	P	F	Q	W	A	G	P	G	A	A	P	E	D	I	G	G	I	V	A	A	D	L	R	N	S	G	K	F	N	P	L	D	R	A	R	L	P	Q	Q	P	G	S	A	Q	E	V	Q	P	A	A	W	S	A	L	G	I	D	A	V	V	V
Template Known Secondary structure										S		S		S											S	S	S	S			S	S													T	S	S						G	G	G		S				S	S	S	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	T	P	N	P	D	G	S	Y	N	V	A	Y	Q	L	V	D	T	G	G	A	P	G	T	V	L	A	Q	N	S	Y	K	V	N	K	Q	W	L	R	Y	A	G	H	T	A	S	D	E	V	F	E	K	L	T	G	I	K	G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	V	T	P	N	P	D	G	S	Y	N	V	A	Y	Q	L	V	D	T	G	G	A	P	G	T	V	L	A	Q	N	S	Y	K	V	N	K	Q	W	L	R	Y	A	G	H	T	A	S	D	E	V	F	E	K	L	T	G	I	K	G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E
Template Known Secondary structure								T	T	S												S	S	S	T	T												G	G	G																		S	S				T	T										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A
Template Known Secondary structure							T	T	S		S								S	S									T	T	S	S								T	T	S	S								T	T	T										S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S
Template Known Secondary structure				T	T	S	S								T	T	T										S	S									T	T	S	S								T	T	S	S								T	T	S									S	S	S									T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V
Template Known Secondary structure		T	S	S									T	T									T	T	T									S	S	S								T	T	S	S									T	T									T	T	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		422	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	P	A	W	S	P	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	P	A	W	S	P	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions