Job Description P0A855 Confidence 99.61% Date Thu Jan 5 11:06:56 GMT 2012 Rank 73 Aligned Residues 221 % Identity 14% Template c2vduB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(7)-)-methyltransferase- PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex Resolution 2.40 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	.	.	.	.	.	.	.	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		P	L	Q	N	L	L	T	S	R	D	G	S	L	V	F	A	I	I	K	N	.	.	.	.	C	I	L	S	F	K	Y	Q	S	P	N	H	W	E	F	A	G	K	W	S	D	D	F	P	I	Y	S	Y	I	R	N	L	R	L	T	S	D	E	S	R	L	I	A	C	A	D	S	D	K	S	L	L	V	F	D	V
Template Known Secondary structure										S	S	S	S							T	T	.	.	.	.									T	T	T																									T	T	S	S							G	G	G	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		274	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.
Predicted Secondary structure							.	.	.																																																.	.																				.	.
Query SS confidence							.	.	.																																																.	.																				.	.
Query Sequence		D	L	A	S	G	.	.	.	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	.	.	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	.	.	F	M
Query Conservation							.	.	.																																																.	.																				.	.
Alig confidence							.	.	.																																																.	.																				.	.
Template Conservation
Template Sequence		D	K	T	S	K	N	V	L	K	L	R	K	R	F	C	F	S	K	R	P	N	A	I	S	I	A	E	D	D	T	T	V	I	I	A	D	K	F	G	D	V	Y	S	I	D	I	N	S	I	P	E	E	K	F	T	Q	E	P	I	L	G	H	V	S	M	L	T	D	V	H	L	I	K	D	S	D	G	H	Q	F
Template Known Secondary structure			S	S	S	S	S											S	S									T	T	S	S							T	T	S							T	T	S				S	S						S				S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.
Predicted Secondary structure																																																														.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	.	D	G	R	F	K	A	R	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.								.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.
Template Sequence		I	I	T	S	D	R	D	E	H	I	K	I	S	H	Y	P	Q	C	F	I	V	D	K	W	L	F	G	H	K	H	F	V	S	S	I	C	C	G	K	D	Y	L	L	L	S	A	G	G	D	D	.	.	.	K	I	F	A	W	D	W	K	T	G	K	N	L	S	T	F	D	Y	N	S	L	I	K	P	Y	L	N
Template Known Secondary structure							T	T	S								S		T	T										S	S									S	T	T							S	S	S	.	.	.							T	T	T														G	G	G
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
						415	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		D	Q	H	L	A	I	I	E	F	A	V	S	K	I	I	K	S	K
Template Known Secondary structure		T	T	S	B			B											S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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