Job Description P0A855 Confidence 28.25% Date Thu Jan 5 11:06:56 GMT 2012 Rank 186 Aligned Residues 198 % Identity 10% Template c2p9wA_ PDB info PDB header:allergen Chain: A: PDB Molecule:mal s 1 allergenic protein; PDBTitle: crystal structure of the major malassezia sympodialis allergen mala s2 1 Resolution 1.35 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T
Query Conservation
Alig confidence																				.	.																	.
Template Conservation																				.	.																	.
Template Sequence		T	I	Y	D	R	T	R	Q	V	F	Y	Q	S	N	L	Y	K	G	.	.	R	I	E	V	Y	N	P	K	T	Q	S	H	F	N	V	V	.	I	D	G	A	S	S	N	G	D	G	E	Q	Q	M	S	G	L	S	L	L	T	H	D	N	S	K	R	L	F	A	V	M	K	N	A	K	S	F	N	F	A	D	Q
Template Known Secondary structure						T	T	T	T							T	T	T	T	.	.							T	T	T								.		T	T	T			S	S			S									S	S	S	S	S											T	T	T	T		T	T	S
Template Predicted Secondary structure																				.	.																	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		S	S	H	G	A	S	S	F	H	S	F	N	L	.	.	.	.	.	.	.	P	L	S	E	N	S	K	P	V	W	S	V	N	F	E	K	V	Q	D	E	F	E	K	K	A	G	K	R	P	F	G	V	V	Q	S	A	Q	D	R	D	G	N	S	Y	V	A	F	A	L	G	M	P	A	I	A	R	V	S	A	D
Template Known Secondary structure			S	S	S									S	.	.	.	.	.	.	.	S			T	T				S					S												S	S												T	T	S									S	S								T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		365	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		T	G	G	V	Q	V	L	.	.	.	.	.	.	.	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																										.	.	.
Template Conservation																																									.	.	.
Template Sequence		G	K	T	V	S	T	F	A	W	E	S	G	N	G	G	Q	R	P	G	Y	S	G	I	T	F	D	P	H	S	N	K	L	I	A	F	G	G	P	R	.	.	.	A	L	T	A	F	D	V	S	K	P	Y	A	W	P	E	P
Template Known Secondary structure		S													S	S	S			S		S						T	T	T	T						S	S	S	S	.	.	.	S							S	S	S	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions