Job Description P0A855 Confidence 96.66% Date Thu Jan 5 11:06:56 GMT 2012 Rank 160 Aligned Residues 158 % Identity 9% Template c2j04C_ PDB info PDB header:transcription Chain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic Resolution 3.2 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I
Query Conservation
Alig confidence																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	T	W	A	R	D	G	T	L	Y	L	T	T	F	P	.	.	.	.	.	D	I	S	I	G	Q	P	K	Y	A	K	D	I	N	C	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	L	F	H	V	K	E	F	P	L	E	F	E	N	K	L	D	F	E	L	A	Q	Q	N	G	L	L	N
Template Known Secondary structure							T	T	S							S	S	.	.	.	.	.	S										S			S	S	B	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T													T	T	T	T	S				S	S		S	S	T
Template Predicted Secondary structure																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.														.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	.	.	.	.	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L
Query Conservation																																																	.	.	.	.
Alig confidence																													.	.	.																		.	.	.	.																							.	.	.
Template Conservation																													.	.	.																																												.	.	.
Template Sequence		S	Q	P	V	C	Y	P	R	V	C	K	P	S	P	I	D	D	W	M	A	V	L	S	N	N	G	N	.	.	.	V	S	V	F	K	D	N	K	M	L	T	N	L	D	S	K	G	N	L	S	S	R	T	Y	H	C	F	E	W	N	P	I	E	S	S	I	V	V	G	N	E	D	G	.	.	.	E	L	Q	F
Template Known Secondary structure		T	S		S										S	S	S	S							T	T	S		.	.	.					S	S	S	S								S	S		S	T	T	T									S	S	S	S							T	T	S	.	.	.
Template Predicted Secondary structure																													.	.	.																																												.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.
		404	.	.				.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		V	S	T	.	.	.	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P	Y
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		F	S	I	R	K	N	S	E	N	T	P	E	F	Y	F	E	S	S	I	R	L	S	D	A	G	S	K	D	W
Template Known Secondary structure								T	T	T													S		T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions