Job Description P0A855 Confidence 99.76% Date Thu Jan 5 11:06:56 GMT 2012 Rank 47 Aligned Residues 240 % Identity 11% Template c2j04B_ PDB info PDB header:transcription Chain: B: PDB Molecule:ydr362cp; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic Resolution 3.2 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		T	G	I	K	G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	.	.	.	.	.	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	.	.	.	.	.	.	K	L	A	Y	V	T	F	E	S	G	R	S	A
Query Conservation																																					.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																						.	.	.	.												.	.	.	.	.																						.	.	.	.	.	.										.	.	.
Template Conservation																						.	.	.	.																																																					.	.	.
Template Sequence		E	N	T	D	I	G	K	D	I	Q	Y	L	A	V	A	V	S	Q	S	S	.	.	.	.	C	I	Q	I	F	K	M	N	T	S	T	L	H	C	V	K	V	Q	T	I	V	H	S	F	G	E	V	W	D	L	K	W	H	E	G	C	H	A	P	H	L	V	G	C	L	S	F	V	S	Q	E	G	.	.	.	T
Template Known Secondary structure					S	S		S	S													.	.	.	.									T	T	T															S								S	S				S	S	S	S								T	T	S	.	.	.
Template Predicted Secondary structure																						.	.	.	.																																																					.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.
		226	.	.	.	230	.	.	.	.	.													.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	I	Q	T	L	A	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																													.	.
Template Sequence		I	N	F	L	E	I	I	D	N	A	T	D	V	H	V	F	K	M	C	E	K	P	S	L	T	L	S	L	A	D	S	L	I	T	T	F	D	F	L	S	P	T	T	.	.	V	V	C	G	F	K	N	G	F	V	A	E	F	D	L	T	D	P	E	V	P	S	F	Y	D	Q	V	H	D	S	Y	I	L	S	V
Template Known Secondary structure											S	S	S	S	S							S		S						T	T	T								S	S	S	S		.	.						T	T	S							T	T	B		S	S		S						S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		294			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure			.	.																												.
Query SS confidence			.	.																												.
Query Sequence		T	.	.	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	.	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V
Query Conservation			.	.																												.
Alig confidence			.	.																												.																											.
Template Conservation																																																											.
Template Sequence		S	T	A	Y	S	D	F	E	D	T	V	V	S	T	V	A	V	D	G	Y	F	Y	I	F	N	P	K	D	I	A	T	T	K	T	T	V	S	R	F	R	G	S	N	L	V	P	V	V	Y	C	P	Q	I	Y	S	Y	I	.	Y	S	D	G	A	S	S	L	R	A	V	P	S	R	A	A	F	A	V	H	P	L
Template Known Secondary structure							T	T	S									T	T	S							G	G	G												S			S								T	T	T	T				.				S	S	S							T	T		T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		V	S	R	E	T	T	I	T	A	I	G	V	S	R	L	H	P	M	V	L	A	G	S	A	D	G	.	.	.	S	L	I	I	T	N	A	A	R	R
Template Known Secondary structure					S	S									S	S			B						T	T	T	.	.	.						B	S		S	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions