Job Description P0A855 Confidence 71.89% Date Thu Jan 5 11:06:56 GMT 2012 Rank 178 Aligned Residues 169 % Identity 16% Template c2hz6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:endoplasmic reticulum to nucleus signalling 1 PDBTitle: the crystal structure of human ire1-alpha luminal domain Resolution 3.10 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																															.															.	.	.
Query SS confidence																															.															.	.	.
Query Sequence		P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	.	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	.	.	.	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T
Query Conservation																															.															.	.	.
Alig confidence					.	.										.	.														.															.	.	.										.	.	.	.	.
Template Conservation					.	.										.	.																																									.	.	.	.	.
Template Sequence		P	E	T	.	.	L	L	F	V	S	T	L	D	G	.	.	S	L	H	A	V	S	K	R	T	G	S	I	K	W	T	L	K	E	D	P	V	L	Q	V	P	P	A	F	L	P	D	P	N	D	G	S	L	Y	T	L	.	.	.	.	.	E	G	L	T	K	L	P	F	T	I	P	E	L	V	Q	A	S	P	C
Template Known Secondary structure			T	T	.	.							T	T	S	.	.							T	T	T												S											T	T	T							.	.	.	.	.			S				S								T	T		S
Template Predicted Secondary structure					.	.										.	.																																									.	.	.	.	.
Template SS confidence
		29	30	.			.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A
Query Conservation
Alig confidence																												.	.																																											.	.
Template Conservation																												.	.																																											.	.
Template Sequence		R	L	Y	M	G	K	K	Q	D	I	W	Y	V	I	D	L	L	L	Y	L	G	R	T	E	Y	T	.	.	I	T	M	Y	D	T	K	T	R	E	L	R	W	N	A	T	Y	F	D	Y	A	A	S	L	P	E	D	D	V	D	Y	K	M	S	H	F	V	S	N	G	D	G	.	.	L	V	V	T	V	D	S	E
Template Known Secondary structure																												.	.						S	S	S	S	S													B						T	T										T	S		.	.							T	T
Template Predicted Secondary structure																												.	.																																											.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.
		365	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		T	G	G	V	Q	.	.	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		S	G	D	V	L	W	I	Q	N	Y	A	S	P	V	V	A	F	Y	V	W	Q	R	E	G	L	R	K	V
Template Known Secondary structure		T										S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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