Job Description P0A855 Confidence 98.80% Date Thu Jan 5 11:06:56 GMT 2012 Rank 139 Aligned Residues 211 % Identity 16% Template c2fp8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:strictosidine synthase; PDBTitle: structure of strictosidine synthase, the biosynthetic entry to the2 monoterpenoid indole alkaloid family Resolution 2.30 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		S	F	T	F	D	S	T	N	K	G	F	Y	T	S	V	Q	D	G	.	.	.	R	V	I	K	Y	E	G	P	N	S	G	F	V	D	F	A	Y	A	S	P	Y	W	N	K	A	F	C	E	N	S	T	D	A	E	K	R	P	L	C	G	R	T	Y	D	I	S	Y	N	L	Q	N	N	Q	L	Y	I	V	D	C
Template Known Secondary structure							T	T		S	S						T	T	S	.	.	.								T	T	T								S		T	T							T	T				G	G	G														T	T	T	T							T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	.	.	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R
Query Conservation																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	H	L	S	V	V	G	S	E	G	G	H	A	T	Q	L	A	T	S	V	D	G	V	P	F	K	W	L	Y	A	V	T	V	D	Q	R	T	G	I	V	Y	F	T	D	V	S	T	L	Y	D	D	R	G	V	Q	Q	I	M	D	T	S	D	K	T	G	R	L	I	K	Y	D	P	S	T	K	E	T	T	L
Template Known Secondary structure		T	T							T	T									S			T	T				S									T	T	T								S		S	S			T	T									T											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.																																		.	.	.	.	.	.
Query SS confidence																																								.	.	.																																		.	.	.	.	.	.
Query Sequence		I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	.	.	.	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	.	.	.	.	.	.
Query Conservation																																								.	.	.																																		.	.	.	.	.	.
Alig confidence																														.	.									.	.	.																																		.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		L	L	K	E	L	H	V	P	G	G	A	E	V	S	A	D	S	S	F	V	L	V	A	E	F	L	S	H	.	.	Q	I	V	K	Y	W	L	E	G	P	K	K	G	T	A	E	V	L	V	K	I	P	N	P	G	N	I	K	R	N	A	D	G	H	F	W	V	S	S	S	E	E	L	D	G	N	M	H	G	R
Template Known Secondary structure							S									T	T	S	S							G	G	G	T	.	.							S	S	S	T	T	T	T									S	S								T	T	S										T	T	S	S	T	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
			398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	D	P	K	G	I	K	F	D	E	F	G	N	I	L	E	V	I	P	L	P	P	P
Template Known Secondary structure											T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions