Job Description P0A855 Confidence 99.94% Date Thu Jan 5 11:06:56 GMT 2012 Rank 13 Aligned Residues 257 % Identity 19% Template c2eepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor Resolution 2.20 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	.	.	.	.	.	L	A	N	G	A
Query Conservation																																																																								.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																									.	.	.	.							.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																									.	.	.	.
Template Sequence		L	D	A	G	R	G	L	V	V	L	F	T	Q	G	.	.	.	.	.	.	G	L	V	G	F	D	M	L	A	R	K	V	T	Y	L	F	D	T	N	E	E	T	A	S	L	D	F	S	P	V	G	D	R	V	A	Y	V	R	N	H	.	.	.	.	N	L	Y	I	A	R	G	G	K	L	G	E	G	M	S	R
Template Known Secondary structure				T	T	T	T							T	T	.	.	.	.	.	.							T	T	T	T									T	T			T	T					T	T	S	S							T	T	.	.	.	.								B		T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		236	.	.	.	240	.	.	.	.																.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																															.	.	.	.	.	.	.	270
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	Q	V	A	S	F	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	T	G	S	L	N	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	A	V	T	I	D	G	T	E	T	L	V	Y	G	Q	A	V	H	Q	R	E	F	G	I	E	K	G	T	F	W	S	P	K	G	S	C	L	A	F	Y	R	M	D	Q	S	M	V	K	P	T	P	I	V	D	Y	H	P	L	E	A	E	S	K	P	L	Y	Y	P	M	A	G	T	P	S	H	H	V	T	V
Template Known Secondary structure					S		S			B	T	T				S	S			G	G	G		T	T				S					T	T	S	S										T	T	S										S	S	S										B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.								.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																					.	.																			.	.	.	.	.	.	.
Query SS confidence																						.	.	.																					.	.																			.	.	.	.	.	.	.
Query Sequence		Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	.	.	.	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	.	.	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	.	.	.	.	.	.	.	W	E	G	S	Q	N	Q	D	A	D
Query Conservation																						.	.	.																					.	.																			.	.	.	.	.	.	.
Alig confidence																						.	.	.																					.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	Y	H	L	A	T	G	K	T	V	Y	L	Q	T	G	E	P	K	E	K	F	L	T	N	L	S	W	S	P	D	E	N	I	L	Y	V	A	E	V	N	R	A	Q	N	E	C	K	V	N	A	Y	D	A	E	T	G	R	F	V	R	T	L	F	V	E	T	D	K	H	Y	V	E	P	L	H	P	L	T	F
Template Known Secondary structure						T	T	T	T									S		T	T										T	T	S	S									T	T	S										T	T	T													S	S						S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																								.	.																				.	.
Query SS confidence																																								.	.																				.	.
Query Sequence		V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	.	.	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	.	.	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L
Query Conservation																																								.	.																				.	.
Alig confidence																																								.	.																				.	.
Template Conservation
Template Sequence		L	P	G	S	N	N	Q	F	I	W	Q	S	R	R	D	G	W	N	H	L	Y	L	Y	D	T	T	G	R	L	I	R	Q	V	T	K	G	E	W	E	V	T	N	F	A	G	F	D	P	K	G	T	R	L	Y	F	E	S	T	E	A	S	P	L	E	R	H	F	Y	C	I	D	I	K	G	G	K	T	K	D	L
Template Known Secondary structure			T	T		S	S								T	T	S	S								T	T	S							S		S	S	S										T	T	S								S	S	S		T	T		B							T	T							S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		T	P	.	E	S	G	M	H	R	T	Q	L	S	P
Template Known Secondary structure				.	S	S	S								S
Template Predicted Secondary structure				.
Template SS confidence
		424	.		.	.	.	.	430	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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