Job Description P0A855 Confidence 99.92% Date Thu Jan 5 11:06:56 GMT 2012 Rank 19 Aligned Residues 261 % Identity 20% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	.	.	.	.	.	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.																		.
Template Conservation																																																																	.
Template Sequence		A	P	D	G	S	R	V	T	F	L	R	G	K	D	S	D	R	N	Q	L	D	L	W	S	Y	D	I	G	S	G	Q	T	R	L	L	V	D	S	K	V	V	L	A	M	T	G	I	V	D	Y	Q	W	S	P	D	A	Q	R	L	L	F	P	L	.	G	G	E	L	Y	L	Y	D	L	K	Q	E	G	K	A	A
Template Known Secondary structure			T	T	S	S									S	S		T	T									T	T	T									G	G	G	T						S							T	T	S	S							.	T	T							S	S	S		S	T	T	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	P	T	W	F	P	D
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		V	R	Q	L	T	H	G	E	G	F	A	T	D	A	K	L	S	P	K	G	G	F	V	S	F	I	R	G	R	.	.	.	.	N	L	W	V	I	D	L	A	S	G	R	Q	M	Q	L	T	A	D	G	S	T	T	I	G	N	G	I	A	E	F	V	A	D	E	E	M	D	R	H	T	G	Y	W	W	A	P	D
Template Known Secondary structure				B				S	S	S									T	T	S	S							T	T	.	.	.	.							T	T	T	T											S	S				S										S					S					T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																																			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	A	I	A	Y	A	R	I	D	E	S	P	V	P	V	Q	K	R	Y	E	V	Y	A	D	R	T	D	V	I	E	Q	R	Y	P	A	A	G	D	A	N	V	Q	V	K	L	G	V	I	S	P	A	E	Q	A	Q	T	Q	W	I	D	L	G	K	E	Q	D	I	Y	L	A	R	V	N	W	R	D	P	Q	H
Template Known Secondary structure		S	S										T	T	S										S	S											B	T	T	S												S	S	T	T										S		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		345	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure							.																														.	.	.	.	.	.
Query SS confidence							.																														.	.	.	.	.	.
Query Sequence		F	M	V	M	V	.	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	.	.	.	.	.	.	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T
Query Conservation							.																														.	.	.	.	.	.
Alig confidence							.																														.	.	.	.	.	.										.																							.
Template Conservation																																																				.																							.
Template Sequence		L	S	F	Q	R	Q	S	R	D	Q	K	K	L	D	L	V	E	V	T	L	A	S	N	Q	Q	R	V	L	A	H	E	T	S	P	T	W	V	P	L	H	N	S	L	R	F	L	D	D	G	S	.	I	L	W	S	S	E	R	T	G	F	Q	H	L	Y	R	I	D	S	K	G	K	A	.	A	A	L	T	H	G
Template Known Secondary structure									T	T	S	S									T	T	T												S	S						S						T	T	S		.							T	T	S	S								S	S	S			.			S			S
Template Predicted Secondary structure																																																				.																							.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	V	K	F	P	A	W	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	W	S	V	D	E	L	L	A	V	D
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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