Job Description P0A855 Confidence 99.79% Date Thu Jan 5 11:06:56 GMT 2012 Rank 37 Aligned Residues 285 % Identity 14% Template c2bklB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:prolyl endopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl2 endopeptidases: role of inter-domain dynamics in3 catalysis and specificity Resolution 1.5 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.
Query Sequence		Y	A	G	H	T	A	S	D	E	V	F	E	K	L	T	G	I	K	G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	.	.	.	.	.	.	.	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A
Query Conservation																																																							.	.	.	.	.	.	.
Alig confidence																																					.																		.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		A	L	A	A	R	F	K	E	L	F	Y	T	D	S	V	S	T	P	S	R	R	N	G	R	F	F	Y	V	R	T	H	K	D	K	E	.	K	A	I	L	Y	W	R	Q	G	E	S	G	Q	E	K	V	L	L	D	P	N	G	W	S	K	D	G	T	V	S	L	G	T	W	A	V	S	W	D	G	K	K	V	A
Template Known Secondary structure												S											T	T									T	T		S	.	S								T	T	T	S								G	G	G	S	S	S	S	S											T	T	S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		216	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure										.	.																							.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																							.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	T	F	E	S	G	R	.	.	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	.	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	.	.	.	.	.	.	.	.	.	.	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q
Query Conservation										.	.																							.																					.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																							.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Q	K	P	N	A	A	D	E	A	V	L	H	V	I	D	V	D	S	G	E	W	S	K	V	D	V	I	E	G	G	K	Y	A	T	P	K	W	T	P	D	S	K	G	F	Y	Y	E	W	L	P	T	D	P	S	I	K	V	D	E	R	P	G	Y	T	T	I	R	Y	H	T	L	G	T	E	P	S	K	D
Template Known Secondary structure							T	T		S									T	T	T			B		S	S			B	S			T	T							T	T	S	S											T	T	S		T	T	T	G	G	G	G								T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		283						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		V	.	.	.	.	.	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		T	V	V	H	E	R	T	G	D	P	T	T	F	L	Q	S	D	L	S	R	D	G	K	Y	L	F	V	Y	I	L	R	G	W	S	E	N	D	V	Y	W	K	R	P	G	E	K	D	F	R	L	L	V	K	G	V	G	A	K	Y	E	V	H	A	W	K	D	R	F	Y	V	L	T	D	E	G	A	P	R	Q	R
Template Known Secondary structure											T	T									T	T	S	S									T	T	T									T	T		S	S								S	S									T	T								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																																.
Query SS confidence												.	.	.	.																																																.
Query Sequence		I	A	K	Q	D	L	A	T	G	G	.	.	.	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	.	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation												.	.	.	.																																																.
Alig confidence												.	.	.	.																																																.
Template Conservation
Template Sequence		V	F	E	V	D	P	A	K	P	A	R	A	S	W	K	E	I	V	P	E	D	S	S	A	S	L	L	S	V	S	I	V	G	G	H	L	S	L	E	Y	L	K	D	A	T	S	E	V	R	V	A	T	L	K	G	K	P	V	R	T	V	Q	L	P	G	V	G	A	A	S	N	L	M	G	L	E
Template Known Secondary structure						B	T	T	B		S	G	G	G									S	S										T	T									T	T									T	T										S	S	S	S						B	S		T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions