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Job DescriptionP0A855
Confidence99.72%DateThu Jan 5 11:06:56 GMT 2012
Rank54Aligned Residues258
% Identity14%Templatec2aq5A_
PDB info PDB header:structural proteinChain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of murine coronin-1
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RTRIAYVVQTNGGQFPYELRVSDYDGYNQF. . . . VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA. . . .
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Template Sequence  PKFMALIEASGGG. . . . AFLVLPLGKTGRVDKNVPLVGHTAPVLDIAWPHNDNVIASGSEDC. . . TVMVWEIPDGGLVLP
Template Known Secondary structure  SS


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   44.....50...... ...60.........70.........80.........90.........100. ........110......
 
   236...240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  . . . . VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR
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Template Sequence  LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRV
Template Known Secondary structure 

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   120.........130.........140.........150.........160.........170.........180.........190.........
 
   312.......320.........330.........340.........350.........360....... ..370.........380.......
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Query Sequence  PQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG. . . . VQVLSSTFLDETPSLAPNGT
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Template Sequence  RVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTN
Template Known Secondary structure  TTTT
SS
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   388.390.........400.........410.........420 ........
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Query Sequence  MVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ. . VKFPAWSP
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Template Sequence  IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP
Template Known Secondary structure  TT
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   281........290.........300.........310.........320...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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