Job Description P0A855 Confidence 99.80% Date Thu Jan 5 11:06:56 GMT 2012 Rank 36 Aligned Residues 261 % Identity 16% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.												.	.	.																								.	.
Query SS confidence																							.	.	.												.	.	.																								.	.
Query Sequence		A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	.	.	.	G	Y	N	Q	F	V	V	H	R	S	P	.	.	.	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	.	.	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V
Query Conservation																							.	.	.												.	.	.																								.	.
Alig confidence																							.	.	.												.	.	.																								.	.
Template Conservation
Template Sequence		V	F	Y	S	W	N	S	G	L	M	N	Q	S	Q	L	L	V	R	P	A	D	A	P	V	G	T	K	G	R	V	L	L	D	P	N	T	W	A	T	A	L	D	A	W	A	A	S	D	D	G	R	L	L	A	Y	S	V	Q	D	G	G	S	D	W	R	T	V	K	F	V	G	V	A	D	G	K	P	L	A	D
Template Known Secondary structure									S	S		S	S								T	T	S		T	T									G	G	G												T	T	S	S									T	T		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																														.	.																		.	.	.	.	.
Query SS confidence																														.	.																		.	.	.	.	.
Query Sequence		A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	.	.	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	.	.	.	.	.	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P
Query Conservation																														.	.																		.	.	.	.	.
Alig confidence																														.	.																		.	.	.	.	.
Template Conservation
Template Sequence		E	L	K	W	V	K	F	S	G	L	A	W	L	G	N	D	A	L	L	Y	S	R	F	A	E	P	L	N	Y	N	Q	T	V	W	L	H	R	L	G	T	P	Q	S	A	D	Q	P	V	F	A	T	P	E	L	P	K	R	G	H	G	A	S	V	S	S	D	G	R	W	V	V	I	T	S	S	E	G	T	D	P
Template Known Secondary structure								S						S	T	T	S																						T	T	S		G	G	G								T	T		T	T									T	T	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		313	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																																		.	.
Query SS confidence							.	.	.	.	.																																																		.	.
Query Sequence		Q	V	Y	K	V	.	.	.	.	.	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	.	.	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N
Query Conservation							.	.	.	.	.																																																		.	.
Alig confidence							.	.	.	.	.																																																		.	.
Template Conservation
Template Sequence		V	N	T	V	H	V	A	R	V	T	N	G	K	I	G	P	V	T	A	L	I	P	D	L	K	A	Q	W	D	F	V	D	G	V	G	D	Q	L	W	F	V	S	G	D	G	A	P	L	K	K	I	V	R	V	D	L	S	G	S	T	P	R	F	D	T	V	V	P	E	S	K	D	N	L	E	S	V	G	I	A
Template Known Secondary structure												T	T											S	S	S	S									T	T								T	T		T	T									S	S	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	.	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		G	N	R	L	F	A	S	Y	I	H	D	A	K	S	Q	V	L	A	F	D	L	D	G	K	P	A	G	A	V	S	L	P	G	I	G	S	A	S	G	L	S	G	R	P
Template Known Secondary structure		B	T									T	T									T	T	S							B		S	S	S										B
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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