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Job DescriptionP0A855
Confidence71.90%DateThu Jan 5 11:06:56 GMT 2012
Rank177Aligned Residues289
% Identity15%Templatec1yiqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:quinohemoprotein alcohol dehydrogenase; PDBTitle: molecular cloning and structural analysis of2 quinohemoprotein alcohol dehydrogenase adhiig from3 pseudomonas putida hk5. compariison to the other4 quinohemoprotein alcohol dehydrogenase adhiib found in the5 same microorganism.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180....... ..190.....
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Query Sequence  QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDY. DGYNQFVV
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Template Sequence  RLEAIDAKTGQRAWSVDTRADHKRS. . . . . . . . . . . . YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF
Template Known Secondary structure  TTT



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   132.......140.........150...... ...160.........170.........180.........190.........
 
   196 ...200.........210.........220.... ...
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Query Sequence  H. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RSPQPLMSPAWSPDGSKLAYVTFESGRS. . . . . . . . . . . . . . . . . ALV
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Template Sequence  YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN. LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV
Template Known Secondary structure  SS


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   200.........210.........220.........230.........240....... ..250.........260.........270........
 
   228.230.........240 .........250.........260.........270.........280.........290.......
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Query Sequence  IQTLANGAVRQVA. . . . . . . . . . SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFP
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Template Sequence  AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM
Template Known Secondary structure  TTT

SSTT

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S
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   279280.........290.........300.........310.........320.........330.........340.........350........
 
   298.300.........310.........320.........330.........340.........350.....
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Query Sequence  DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQ. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KTGRPILDEENAAYWKN. . . . GKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL
Template Known Secondary structure  TTT

TTTS....SS
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   359360.........370..... ....380.........390.........400.........410.........420.........430....
 
   356...360......... 370.........380.........390.........400...... ...410...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . QHIAKQDLATGGVQ. VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST. DGRFKAR
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Template Sequence  RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADG. . . RVIAYAADTGEKLWE
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SSTT
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   435....440.........450.........460.........470.........480.........490...... ...500.........510.
 
   414.....420.....
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Query Sequence  LPATDGQVKFPA
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Template Sequence  QPAASGVMAAPV
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   512.......520...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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