Job Description P0A855 Confidence 99.78% Date Thu Jan 5 11:06:56 GMT 2012 Rank 42 Aligned Residues 256 % Identity 14% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																											.	.
Query SS confidence																																			.	.	.	.	.	.	.																											.	.
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	.	.	.	.	.	.	.	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	.	.	R	S	A	L	V	I	Q	T	L	A	N	G
Query Conservation																																			.	.	.	.	.	.	.																											.	.
Alig confidence																.																			.	.	.	.	.	.	.																											.	.
Template Conservation																.
Template Sequence		G	K	R	Y	F	Y	F	Y	N	T	G	L	Q	N	.	Q	R	V	L	Y	V	Q	D	S	L	E	G	E	A	R	V	F	L	D	P	N	I	L	S	D	D	G	T	V	A	L	R	G	Y	A	F	S	E	D	G	E	Y	F	A	Y	G	L	S	A	S	G	S	D	W	V	T	I	K	F	M	K	V	D	G	A
Template Known Secondary structure		T	T									S	S		S	.	S							S	S	S	S	S								G	G	G	G		S	S	S											T	T	S	S									T	T		S									T	T	T	T
Template Predicted Secondary structure																.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.														.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		A	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	.	.	.	.	.	D	G	R	S	N	N	T	E	P	T	W	F
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence						.																								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation						.
Template Sequence		K	E	L	P	.	D	V	L	E	R	V	K	F	S	M	A	W	T	H	D	G	K	G	M	F	Y	N	A	Y	P	Q	Q	D	G	K	S	D	G	T	E	T	S	T	N	L	H	Q	K	L	Y	Y	H	V	L	G	T	D	Q	S	E	D	I	L	C	A	E	F	P	D	E	P	K	W	M	G	G	A	E	L	S
Template Known Secondary structure						.														T	T	S	S											S	S			S	S	S															T	T	S		G	G	G								T	T		T	T
Template Predicted Secondary structure						.
Template SS confidence
		162	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		297	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.								.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure											.																																.	.	.	.	.	.	.																			.													.
Query SS confidence											.																																.	.	.	.	.	.	.																			.													.
Query Sequence		P	D	S	Q	N	L	A	F	T	.	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	.	.	.	.	.	.	.	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	.	Q	Q	H	I	A	K	Q	D	L	A	T	G	.
Query Conservation											.																																.	.	.	.	.	.	.																			.													.
Alig confidence											.																																.	.	.	.	.	.	.																			.													.
Template Conservation
Template Sequence		D	D	G	R	Y	V	L	L	S	I	R	E	G	D	P	V	N	R	L	W	Y	C	D	L	Q	Q	E	S	N	G	I	T	G	I	L	K	W	V	K	L	I	D	N	F	E	G	E	Y	D	Y	V	T	N	E	G	T	V	F	T	F	K	T	N	R	H	S	P	N	Y	R	L	I	N	I	D	F	T	D	P	E
Template Known Secondary structure		T	T	S																					G	G	G	S	S	S	S	S		S	S									S	S	S	S									T	T								T	T		T	T								T	T	B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
						367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D	G	Q	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	S	K	W	K	V	L	V	P	E	H	E	K	D	V	L	E	W	V	A	C	V	R	S	N	F	L	V	L	C	Y	L	H	D	V	K	N	T	L	Q	L	H	D	L	A	T	G	A	L	L	K	I	F	P	L	E	V	G	S
Template Known Secondary structure		G	G	G									S	S										T	T	T									T	T									T	T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions