Job Description P0A855 Confidence 99.62% Date Thu Jan 5 11:06:56 GMT 2012 Rank 71 Aligned Residues 213 % Identity 10% Template c1pi6A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:actin interacting protein 1; PDBTitle: yeast actin interacting protein 1 (aip1), orthorhombic crystal form Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																							.	.	.	.	.								.												.	.
Query SS confidence																																							.	.	.	.	.								.												.	.
Query Sequence		P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	.	.	.	.	.	V	R	Q	V	A	S	F	.	P	R	H	N	G	A	P	A	F	S	P	.	.	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L
Query Conservation																																							.	.	.	.	.								.												.	.
Alig confidence																								.	.	.	.												.	.	.	.	.								.												.	.							.	.	.
Template Conservation																								.	.	.	.																																												.	.	.
Template Sequence		R	N	F	T	T	H	L	S	Y	D	P	T	T	N	A	I	A	Y	P	C	G	K	.	.	.	.	S	A	F	V	R	C	L	D	D	G	D	S	K	V	P	P	V	V	Q	F	T	G	H	G	S	S	V	V	T	T	V	K	F	S	P	I	K	G	S	Q	Y	L	C	.	.	.	S	G	D	E	S	G	K	V
Template Known Secondary structure		T	T	B								T	T	T	T							T	T	.	.	.	.										S			S	S		S						T	T	T	T	S									S	S	T	T						.	.	.				T	T	S
Template Predicted Secondary structure																								.	.	.	.																																												.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.										.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	.	.	.	.	.	.	.	.	.	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	W	G	W	T	F	D	K	E	S	N	S	V	E	V	N	V	K	S	E	F	Q	V	L	A	G	P	I	S	D	I	S	W	D	F	E	G	R	R	L	C	V	V	G	E	G	R	D	N	F	G	V	F	I	S	W	D	S	G	N	S	L	G	E	V	S	G	H	S	Q	R	I	N	A	C	H	L	K	Q
Template Known Secondary structure										T	T	T	T														S	S									T	T	S										S	S		S						S	S	S			B		B				S		S	S									S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	.	.	.	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R	L	P	A	T	D
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																									.	.
Template Conservation																																																												.	.
Template Sequence		S	R	P	M	R	S	M	T	V	G	D	D	G	S	V	V	F	Y	Q	G	P	P	F	K	F	S	A	S	D	R	T	H	H	K	Q	G	S	F	V	R	D	V	E	F	S	P	D	S	G	E	F	V	I	T	V	G	S	D	.	.	R	K	I	S	C	F	D	G	K	S	G	E	F	L	K	Y	I	E	D	D
Template Known Secondary structure		S	S	S								B	T	T							T	T	T	B								S	S	S		T	T		B								S	T	T									T	T	.	.								T	T	T										T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		419	420
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		249	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions