Job Description P0A855 Confidence 99.79% Date Thu Jan 5 11:06:56 GMT 2012 Rank 38 Aligned Residues 250 % Identity 13% Template c1nnoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrite reductase; PDBTitle: conformational changes occurring upon no binding in nitrite2 reductase from pseudomonas aeruginosa Resolution 2.65 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence												.	.	.																																										.	.	.																		.	.	.	.	.	.
Template Conservation												.	.	.																																										.	.	.
Template Sequence		L	F	S	V	T	L	R	D	A	G	.	.	.	Q	I	A	L	V	D	G	D	S	K	K	I	V	K	V	I	D	T	G	Y	A	V	H	I	S	R	M	S	A	S	G	R	Y	L	L	V	I	G	R	D	A	.	.	.	R	I	D	M	I	D	L	W	A	K	E	P	T	K	V	A	E	I	K	I	G	I	E
Template Known Secondary structure								G	G	G	T	.	.	.							T	T	T										S	S	S								T	T	S								T	T	S	.	.	.							S	S	S	S	S										S	S
Template Predicted Secondary structure												.	.	.																																										.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.													.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	.	.	.	.	.	.	.	.	.	.	.	.	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		A	R	S	V	E	S	S	K	F	K	G	Y	E	D	R	Y	T	I	A	G	A	Y	W	P	P	.	.	Q	F	A	I	M	D	G	E	T	L	E	P	K	Q	I	V	S	T	R	G	M	T	V	D	T	Q	T	Y	H	P	E	P	R	V	A	A	I	I	A	S	H	E	H	P	E	F	I	V	N	V	K	E	T
Template Known Secondary structure										S	T	T		T	T	S									T	T	.	.							T	T	T														S	S	S					S											S	S	S	S							T	T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.						.	.	.	380	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	.	.	.	.	.	D	E	T	P	S	L	A	P
Query Conservation																																																																					.	.	.	.	.
Alig confidence																																															.	.																					.	.	.	.	.
Template Conservation																																															.	.
Template Sequence		G	K	V	L	L	V	N	Y	K	D	I	D	N	L	T	V	T	S	I	G	A	A	P	F	L	H	D	G	G	W	D	S	S	H	R	Y	F	M	T	A	A	N	N	S	N	.	.	K	V	A	V	I	D	S	K	D	R	R	L	S	A	L	V	D	V	G	K	T	P	H	P	G	R	G	A	N	F	V	H	P
Template Known Secondary structure		T								T	T	T	T	S										S	S								T	T	S								G	G	G	T	.	.							T	T	T	T									S	S	S	B			T	T							T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.
Query Sequence		N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	.	.	.	.	.	.	.	.	G	R	F	K	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Query Conservation																									.	.	.	.	.	.	.	.
Alig confidence													.												.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		K	Y	G	P	V	W	S	T	S	H	L	.	G	D	G	S	I	S	L	I	G	T	D	P	K	N	H	P	Q	Y	A	W	K	K	V	A	E	L	Q	G	Q	G	G	G	S	L	F	I	K	T	H	P
Template Known Secondary structure		T	T								B	S	.	S	S	S									T	T	T		T	T	T	B	T	S								S		S									T
Template Predicted Secondary structure													.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions