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Job DescriptionP0A855
Confidence82.67%DateThu Jan 5 11:06:56 GMT 2012
Rank171Aligned Residues285
% Identity13%Templatec1kv9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:type ii quinohemoprotein alcohol dehydrogenase; PDBTitle: structure at 1.9 a resolution of a quinohemoprotein alcohol2 dehydrogenase from pseudomonas putida hk5
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180....... ..190.....
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Query Sequence  QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDY. DGYNQFVV
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Template Sequence  RLIALDAKTGKAIWSQQTTDPAKP. . . . . . . . . . . . . YSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF
Template Known Secondary structure  TTT


S
TTSS.............
B

S

TT

B
TTT

B
TTT

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   128.130.........140.........150. ........160.........170.........180.........190....
 
   196 ...200.........210.........220.... ...
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Query Sequence  H. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RSPQPLMSPAWSPDGSKLAYVTFESGRS. . . . . . . . . . . . . . . . . ALV
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Template Sequence  YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD. LLYVGTGNGSPWNREVRSPGGGDNLYLSSIL
Template Known Secondary structure  SS


TTS

SSTT

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S
TTTT.


SS
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TTTT
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   195....200.........210.........220.........230.........240.. .......250.........260.........270...
 
   228.230......... 240.........250.........260.........270.........280.........290.......
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Query Sequence  IQTLANGAVRQV. . . . . . . . . . ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFP
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Template Sequence  AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL
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TTT

SSTT

S




S
TT

TTSTTT

SS


S
T
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   298.300.........310.........320.........330.........340.........350......
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Query Sequence  DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQ. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ATGRPVEAPGVR. . . . . . . YEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFA
Template Known Secondary structure  TT


TTTT.......
SSS
SS
TT
SS
SS

TTTT




GGG



SS


SS
GG
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   354.....360..... ....370.........380.........390.........400.........410.........420......
 
   357..360......... 370.........380.........390.........400...... ...410.........420..
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Query Sequence  . . . . . . . . . . . . HIAKQDLATGGVQ. VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST. DGRFKARLPATDGQVK
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Template Sequence  DATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAG. . . QMHAYSADKGEALWQFEAQSGIVA
Template Known Secondary structure  G




GGG
TTTTSSS



TTT
TTS...TTT


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S
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   427..430.........440.........450.........460.........470......... 480.........490.........500...
 
   423..
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Query Sequence  FPA
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Template Sequence  APM
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   504..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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