Job Description P0A855 Confidence 99.62% Date Thu Jan 5 11:06:56 GMT 2012 Rank 68 Aligned Residues 257 % Identity 10% Template c1fwxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans Resolution 1.60 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	G	A	F	R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	.	D	G	Y	N	Q	F	V	V	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		A	P	G	Q	L	D	D	Y	Y	G	F	W	S	S	G	Q	S	G	.	.	.	.	E	M	R	I	L	G	I	P	S	M	R	E	L	M	R	V	P	V	F	N	R	C	S	A	T	G	W	G	Q	T	N	E	S	V	R	I	H	E	R	T	M	S	E	R	T	K	K	F	L	A	A	N	G	K	R	I	H	D
Template Known Secondary structure			T	T				S								B	T	T		.	.	.	.								T	T									S	S	S			T	T	T		T	T	T	B									T	T												T	T		S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
							199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																														.	.																									.	.	.	.
Query SS confidence		.	.	.	.	.																																														.	.																									.	.	.	.
Query Sequence		.	.	.	.	.	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	.	.	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	.	.	.	.
Query Conservation		.	.	.	.	.																																														.	.																									.	.	.	.
Alig confidence		.	.	.	.	.																									.	.																				.	.																									.	.	.	.
Template Conservation																															.	.
Template Sequence		N	G	D	L	H	H	V	H	M	S	F	T	E	G	K	Y	D	G	R	F	L	F	M	N	D	K	A	N	T	.	.	R	V	A	R	V	R	C	D	V	M	K	C	D	A	I	L	E	I	P	N	A	K	G	I	H	G	L	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N	G	E	D	E	T	P	L	V
Template Known Secondary structure					B									T	T												T	T	T	T	.	.							T	T	T	T									S	S			S									S	S	B		S								S				S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
															268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation																																																										.	.
Template Sequence		N	D	G	T	N	M	E	D	V	A	N	Y	V	N	V	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	L	V	S	G	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	.	.	K	G	M	T	L	P	E	M	T	A	A	E	M	D	H	I	V	V	F	N	I	A
Template Known Secondary structure			S	S	S	S	T	T		G	G	G										T	T	T	T									S	S									S	S	S	S							S		T	T	.	.			S	S					T		S	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	.	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R
Query Conservation																																			.
Alig confidence																.	.	.	.																.																														.	.													.
Template Conservation																.	.	.	.																																														.	.													.
Template Sequence		E	I	E	K	A	I	A	A	G	D	Y	Q	E	L	.	.	.	.	N	G	V	K	V	V	D	G	R	K	E	A	S	S	L	F	T	R	Y	I	P	I	A	N	N	P	H	G	C	N	M	A	P	D	K	K	H	L	C	V	A	G	K	L	S	.	.	P	T	V	T	V	L	D	V	T	R	F	D	.	A	V
Template Known Secondary structure									T	T		S				.	.	.	.	T	T							S	G	G	G			S	S								S	S								T	T	S	S							T	T	S	.	.	S	B						G	G	G			.
Template Predicted Secondary structure																.	.	.	.																																														.	.													.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300		.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	E	N	A	D	P	R	S	A	V	V	A	E	P	E	L
Template Known Secondary structure				S				G	G	G	G						B
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions