Job Description P0A855 Confidence 52.53% Date Thu Jan 5 11:06:56 GMT 2012 Rank 181 Aligned Residues 232 % Identity 10% Template c1bpoA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein (clathrin); PDBTitle: clathrin heavy-chain terminal domain and linker Resolution 2.60 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	R	I	A	Y	V	V	Q	T	N	G	G	Q	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P
Query Conservation
Alig confidence																	.	.								.	.																														.	.	.	.
Template Conservation																	.	.								.	.																														.	.	.	.
Template Sequence		S	D	K	F	I	C	I	R	E	K	V	G	E	Q	A	.	.	Q	V	V	I	I	D	M	.	.	N	D	P	S	N	P	I	R	R	P	I	S	A	D	S	A	I	M	N	P	A	S	K	V	I	A	L	K	A	.	.	.	.	G	K	T	L	Q	I	F	N	I	E	M	K	S	K	M	K	A	H	T	M	T
Template Known Secondary structure			T	T									T	T			.	.							T	.	.	T	S	T	T	S									S						S	S	S	S							.	.	.	.	T	T							T	T	T	T									S
Template Predicted Secondary structure																	.	.								.	.																														.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.																			.	.	.	.
Query Sequence		R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	.	.	.	.	.	.	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	.	.	.	.	A	G	R	P	Q
Query Conservation																																																	.	.	.	.	.	.																			.	.	.	.
Alig confidence													.										.	.	.	.																							.	.	.	.	.	.																			.	.	.	.
Template Conservation													.										.	.	.	.
Template Sequence		D	D	V	T	F	W	K	W	I	S	L	.	N	T	V	A	L	V	T	D	N	.	.	.	.	A	V	Y	H	W	S	M	E	G	E	S	Q	P	V	K	M	F	D	R	H	S	S	L	A	G	C	Q	I	I	N	Y	R	T	D	A	K	Q	K	W	L	L	L	T	G	I	S	A	Q	Q	N	R	V	V	G	A
Template Known Secondary structure		S										T	.	T							S	S	.	.	.	.							S	S	S	S											G	G	G	T	T										T	T	S	S											T	T
Template Predicted Secondary structure													.										.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.
Predicted Secondary structure																																	.	.	.																																										.	.
Query SS confidence																																	.	.	.																																										.	.
Query Sequence		V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	.	.	.	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	.	.	G	T	M
Query Conservation																																	.	.	.																																										.	.
Alig confidence																																	.	.	.																																										.	.
Template Conservation
Template Sequence		M	Q	L	Y	S	V	D	R	K	V	S	Q	P	I	E	G	H	A	A	S	F	A	Q	F	K	M	E	G	N	A	E	E	S	T	L	F	C	F	A	V	R	G	Q	A	G	G	K	L	H	I	I	E	V	G	T	P	P	T	G	N	Q	P	F	P	K	K	A	V	D	V	F	F	P	P	E	A	Q	N	D	F
Template Known Secondary structure							S	T	T									S										T	T		S	S											S	T	T										S				T	T															T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	M	Q	I	S	E	K	H	D	V	V	F	L	I	T	K	Y	G
Template Known Secondary structure									T	T	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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