Return to main results Retrieve Phyre Job Id

Job DescriptionQ00037
Confidence28.94%DateThu Jan 5 12:33:19 GMT 2012
Rank18Aligned Residues84
% Identity7%Templated1cy5a_
SCOP infoDEATH domain DEATH domain Caspase recruitment domain, CARD
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10...... ...20.........30 .........40.........50.........60.........70.......
Predicted Secondary structure 



....






....















Query SS confidence 










. . . .













. . . .














































Query Sequence  LTSDQKQNYGC. . . . YAAEPNDVQLARYF. . . . HLDERDLAFINQRRGKHNRLGIALQLTTARFLGTFLTDLTQVLPGVQ
Query Conservation 

  

 
   .... 
   
  

   
....


  
   
   
   








  

  
 
      

  

Alig confidence 










....













....














































Template Conservation 
    
  
   
  

  
    

  
    


  
   
    
       

  
  

  

  
   
     
Template Sequence  MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY
Template Known Secondary structure 

T

TSS
TSSSTS
TT
Template Predicted Secondary structure 
















Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   78.80.........
Predicted Secondary structure 



Query SS confidence 











Query Sequence  HFVAVQLNIHRP
Query Conservation    

 

 
   
Alig confidence 











Template Conservation    

  

   
Template Sequence  KDLAALLHDGIP
Template Known Secondary structure  GGG

Template Predicted Secondary structure 




Template SS confidence 











   81........90..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions